Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNU6-740P-201ENST00000364734 105 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RNA5SP366-201ENST00000365454 123 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX5Q8N196 MIR554-201ENST00000384874 96 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RNA5SP213-201ENST00000391031 106 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX5Q8N196 HLFP1-201ENST00000402375 499 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RN7SKP202-201ENST00000410439 330 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 Y_RNA.626-201ENST00000411288 95 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RPL36AP10-201ENST00000421785 322 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 COX6B1P7-201ENST00000430845 235 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX5Q8N196 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX5Q8N196 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX5Q8N196 RPL26P9-201ENST00000457466 433 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RN7SL517P-201ENST00000462240 305 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RN7SL98P-201ENST00000462271 300 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 AC084357.1-201ENST00000473404 255 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 Y_RNA.703-201ENST00000516846 111 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 NACAP3-201ENST00000552100 481 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.72□□□□□ -1.65
SIX5Q8N196 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX5Q8N196 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.72□□□□□ -1.65
SIX5Q8N196 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX5Q8N196 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX5Q8N196 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX5Q8N196 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.65
SIX5Q8N196 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
SIX5Q8N196 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.71□□□□□ -1.65
SIX5Q8N196 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX5Q8N196 AL445487.1-201ENST00000415694 1580 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RNU6-626P-201ENST00000363354 107 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX5Q8N196 RNU6-281P-201ENST00000384212 103 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 U8.10-201ENST00000384260 133 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RNU6-159P-201ENST00000391080 106 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RNU2-61P-201ENST00000411069 191 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.71□□□□□ -1.66
SIX5Q8N196 RPL23AP93-201ENST00000440847 484 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RPL7AP61-201ENST00000443410 636 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.71□□□□□ -1.66
SIX5Q8N196 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RN7SL542P-201ENST00000467147 294 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RN7SL132P-201ENST00000478131 296 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RPS4XP22-201ENST00000480755 780 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RNU6-567P-201ENST00000516746 107 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 AP004242.1-201ENST00000533701 349 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX5Q8N196 MIR5571-201ENST00000577998 113 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 MIR3133-201ENST00000583157 78 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX5Q8N196 AL451007.1-201ENST00000595491 289 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 AC006001.4-201ENST00000622243 395 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX5Q8N196 IGHVIII-44-202ENST00000636235 289 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 MIR492-201ENST00000638676 116 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX5Q8N196 ADAM3A-203ENST00000461344 2157 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX5Q8N196 ZFRP1-201ENST00000457579 2970 ntBASIC4.71□□□□□ -1.66
SIX5Q8N196 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX5Q8N196 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIX5Q8N196 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SIX5Q8N196 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX5Q8N196 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SIX5Q8N196 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SIX5Q8N196 SNORA31-201ENST00000362607 130 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 RNU5F-3P-201ENST00000363767 117 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 Y_RNA.292-201ENST00000364904 97 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 SNORA70.4-201ENST00000365509 134 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 RNU6-20P-201ENST00000384106 107 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 MIR708-201ENST00000390708 88 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 COX6CP10-201ENST00000416832 224 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 MTCO1P5-201ENST00000433573 344 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX5Q8N196 RNU6-58P-201ENST00000517143 103 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 RNU1-45P-201ENST00000517191 141 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX5Q8N196 RPL21P7-201ENST00000557463 483 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 AC021231.3-201ENST00000558497 370 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 MIR4423-201ENST00000580922 80 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 AC010620.2-201ENST00000600135 313 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX5Q8N196 AL136164.3-201ENST00000624429 3978 ntBASIC4.7□□□□□ -1.66
SIX5Q8N196 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX5Q8N196 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX5Q8N196 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX5Q8N196 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX5Q8N196 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX5Q8N196 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX5Q8N196 AC092268.1-201ENST00000342691 405 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 Y_RNA.230-201ENST00000364348 109 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 Y_RNA.570-201ENST00000384750 101 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 AL590762.2-201ENST00000395798 571 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 SNORA11F-201ENST00000408237 128 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 RN7SKP61-201ENST00000410642 295 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 AL358075.3-201ENST00000426289 226 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms