Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU6-799P-201ENST00000363567 107 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 RNU6-1144P-201ENST00000384247 104 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 SNORA26.3-201ENST00000391119 136 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 FTH1P15-201ENST00000406984 280 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 MIR1178-201ENST00000408396 91 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 HMGB1P37-201ENST00000439613 609 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AC125238.1-201ENST00000448842 249 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AL645939.1-201ENST00000453429 797 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AC007215.1-201ENST00000464893 276 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 BX284632.1-201ENST00000478218 541 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 SNORA31.23-201ENST00000517219 133 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AP001328.1-201ENST00000528550 176 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AC006116.3-201ENST00000592968 361 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 IPO5P1-202ENST00000600039 287 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AC005520.5-201ENST00000613926 164 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 MIR6134-201ENST00000617606 109 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AL354798.1-201ENST00000622505 329 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AP001340.1-201ENST00000624405 217 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AC010329.5-201ENST00000623497 2174 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AP000542.2-201ENST00000623199 6179 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 Y_RNA.24-201ENST00000362508 103 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 U8.4-201ENST00000363626 134 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 RNU6-755P-201ENST00000364400 103 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 Y_RNA.287-201ENST00000364853 94 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 RNU6-407P-201ENST00000365280 104 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 RPS12P23-201ENST00000419579 400 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 BPY2DP-201ENST00000422208 265 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 snoU13.4-201ENST00000458916 104 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 RPS17P2-201ENST00000461663 408 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 SNORA31.8-201ENST00000516327 108 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 RNA5SP43-201ENST00000516559 110 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 RNU2-56P-201ENST00000516826 190 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AP006245.2-201ENST00000522004 300 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AC115990.1-201ENST00000526957 301 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AC005255.1-201ENST00000593748 216 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 SNRPGP15-201ENST00000600149 222 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AL391813.1-201ENST00000603098 260 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AC024940.4-201ENST00000605507 246 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 U7.2-201ENST00000607576 63 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AL591926.8-201ENST00000616876 211 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AL136964.1-201ENST00000622038 2990 ntBASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC116Q8IYX3 AC139713.2-214ENST00000642059 1811 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 SNORA73.1-201ENST00000363107 205 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 RNU1-106P-201ENST00000384382 164 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 MIR616-201ENST00000385293 97 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AL121914.1-201ENST00000450188 156 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AC146507.2-201ENST00000460608 476 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 RPSAP50-201ENST00000481955 852 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 FCF1P8-201ENST00000510322 597 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 NACAP3-201ENST00000552100 481 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 FTX_3.1-201ENST00000610451 147 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AL021997.2-201ENST00000615674 271 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AP002799.1-201ENST00000623552 423 ntBASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC116Q8IYX3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms