Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-91P-201ENST00000607774 107 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 U4atac.1-201ENST00000618345 95 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 MIR5739-201ENST00000619803 80 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC092656.1-203ENST00000624134 423 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC138393.1-203ENST00000327086 343 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 MIR412-201ENST00000362142 91 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 RPL23AP32-201ENST00000395315 459 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 RNU2-39P-201ENST00000410604 198 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 RNA5SP508-201ENST00000411327 119 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AL031779.1-201ENST00000415663 330 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 Z99497.1-201ENST00000421282 135 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 snoU109.2-201ENST00000459316 135 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 MED28P2-201ENST00000475771 317 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 CKS1BP2-201ENST00000497342 240 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-759P-201ENST00000516740 103 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-232P-201ENST00000517144 64 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC022616.3-201ENST00000523940 148 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AP002770.2-201ENST00000543613 532 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 MTCYBP33-201ENST00000575007 1130 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC009977.1-201ENST00000586015 570 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AL139286.2-201ENST00000606838 396 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 AC079248.2-201ENST00000623779 326 ntBASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.93□□□□□ -2.1
NUDCD3Q8IVD9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 RBBP8P1-201ENST00000449447 1844 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 Y_RNA.22-201ENST00000362492 102 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-641P-201ENST00000384006 107 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 Y_RNA.500-201ENST00000384466 111 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 RPS3AP36-201ENST00000398190 775 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-1140P-201ENST00000410517 106 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 MED13P1-201ENST00000428342 171 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AL451074.3-201ENST00000437709 472 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 PMCHL2-203ENST00000457791 237 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 BZW1P2-201ENST00000473537 826 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 RAP1BP2-201ENST00000478270 544 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 MTAPP1-201ENST00000489154 819 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC117522.1-201ENST00000509821 380 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 FABP5P5-201ENST00000515537 406 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 MIR548AC-201ENST00000585049 88 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC012065.4-201ENST00000602445 679 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AL713866.2-201ENST00000603579 219 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC092354.1-201ENST00000606057 376 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 AC091304.9-201ENST00000612091 226 ntBASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NUDCD3Q8IVD9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-942P-201ENST00000363002 107 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-553P-201ENST00000364047 96 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 SNORD14B-201ENST00000364533 90 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-72P-201ENST00000384285 79 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 MIR578-201ENST00000384828 96 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 MIR10A-201ENST00000385043 110 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 Y_RNA.598-201ENST00000410480 95 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 EIF1AXP1-201ENST00000419267 435 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AL627311.1-201ENST00000431514 115 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 MTND1P30-201ENST00000441241 901 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC107032.1-201ENST00000485945 480 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 RBBP4P6-201ENST00000508098 202 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC010486.1-201ENST00000511793 424 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 RNU2-46P-201ENST00000517038 113 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC106038.2-201ENST00000520706 568 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC009063.1-201ENST00000563342 702 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC136619.2-201ENST00000563361 631 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms