Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 Y_RNA.23-201ENST00000362496 106 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RNU1-108P-201ENST00000362556 161 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RNA5SP509-201ENST00000364577 119 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RNU1-139P-201ENST00000391307 165 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AL356387.2-201ENST00000422272 243 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AC092017.2-201ENST00000427600 362 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RPS27AP12-201ENST00000429552 465 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 WARS2P1-201ENST00000429678 537 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AL627311.1-201ENST00000431514 115 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AL359073.1-201ENST00000448036 403 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RPL35AP15-201ENST00000468042 339 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 SNORA40.9-201ENST00000515895 93 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RNU4-57P-201ENST00000515980 135 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RNU6-1114P-201ENST00000516022 107 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RNA5SP170-201ENST00000517150 101 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 DEFB131C-201ENST00000528817 165 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 MTND6P33-201ENST00000571794 183 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AL021997.2-201ENST00000615674 271 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AC005296.1-201ENST00000616145 209 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 AC008873.1-201ENST00000625051 138 ntBASIC3.95□□□□□ -1.78
ATG4DQ86TL0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4DQ86TL0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AC008568.2-201ENST00000623862 2313 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 RNU6-80P-201ENST00000384195 107 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 MIR708-201ENST00000390708 88 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 SNORD66.1-201ENST00000391230 76 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 MIR1250-201ENST00000408098 113 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 RNU6-1001P-201ENST00000411265 100 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 MTATP6P4-201ENST00000427725 675 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 CYCSP32-201ENST00000440548 321 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 RPL23AP24-201ENST00000458203 385 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 snoU109.2-201ENST00000459316 135 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AL049874.1-201ENST00000489560 388 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 PPBPP1-201ENST00000510807 373 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 RN7SKP122-201ENST00000515923 296 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 SNORA72.7-201ENST00000516349 94 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 RN7SKP49-201ENST00000516675 260 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AP002001.1-203ENST00000534002 267 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 MIR5695-201ENST00000579717 85 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AC002545.1-201ENST00000592511 181 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 RMST_6.1-201ENST00000611980 203 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 uc_338.13-201ENST00000618243 179 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4DQ86TL0 ZNF204P-201ENST00000416749 2397 ntBASIC3.94□□□□□ -1.78
ATG4DQ86TL0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 MIR331-201ENST00000362302 94 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 Y_RNA.75-201ENST00000362927 97 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 RNA5SP28-201ENST00000363841 119 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 SNORA11F-201ENST00000408237 128 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AL390729.2-201ENST00000416137 156 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AC091390.3-201ENST00000426478 338 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 RPS15AP5-201ENST00000436276 388 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AC096638.1-201ENST00000444678 216 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AC109327.1-201ENST00000471666 403 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 RPL21P13-201ENST00000488305 481 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AC005840.1-201ENST00000498412 377 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 UBL5P4-201ENST00000562584 236 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 AC022968.1-201ENST00000567372 442 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms