Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC069240.1-201ENST00000548774 375 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC005000.2-201ENST00000605468 310 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 SNORA62.6-201ENST00000606322 83 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AL360181.4-201ENST00000621752 134 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-600P-201ENST00000362524 99 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-545P-201ENST00000362681 104 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.277-201ENST00000364754 102 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 U8.8-201ENST00000365399 135 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.352-201ENST00000365439 102 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 MIR490-201ENST00000384865 128 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 MTCO1P39-201ENST00000426148 480 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-953P-201ENST00000459154 107 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 RNU2-58P-201ENST00000516403 183 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 IGLV3-26-201ENST00000520756 302 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 DEFB108E-201ENST00000524692 240 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 SNRPGP16-201ENST00000533275 226 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AMZ2P1-203ENST00000565833 850 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 MIR5692A1-201ENST00000580523 69 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 AC005183.1-201ENST00000603687 1979 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CNKSR3Q6P9H4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AC007685.1-201ENST00000329806 452 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.54-201ENST00000362766 105 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 RNU1-76P-201ENST00000362903 159 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.458-201ENST00000384240 102 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 SNORA69.1-201ENST00000390904 137 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AL591034.2-201ENST00000402839 359 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 HDGFP1-201ENST00000405943 252 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AL513475.1-201ENST00000406602 315 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.592-201ENST00000410274 109 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AL138752.1-201ENST00000452964 351 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 RNU4-71P-201ENST00000516258 113 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-914P-201ENST00000516749 109 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.703-201ENST00000516846 111 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-1212P-201ENST00000517023 104 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 OR4H12P-201ENST00000556269 907 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 CYP4A43P-201ENST00000568156 121 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AC006557.5-201ENST00000603126 811 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AC123912.5-201ENST00000605470 343 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 MIR4275-201ENST00000636486 87 ntBASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.06□□□□□ -1.76
CNKSR3Q6P9H4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 USP8P1-201ENST00000494673 3183 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 SNORD9-201ENST00000362566 104 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.200-201ENST00000364018 102 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 SNORD113-1-201ENST00000365321 69 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 MIR628-201ENST00000385229 95 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-493P-201ENST00000391321 108 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 HSPE1P8-201ENST00000406997 288 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 RPS15AP6-201ENST00000420703 385 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 SNORA31.6-201ENST00000516241 130 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms