Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 ARL5AP4-201ENST00000430731 512 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 NDUFB1P2-201ENST00000449477 176 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 AC115115.1-201ENST00000449927 248 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 RN7SKP57-201ENST00000517248 293 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 AF186190.1-201ENST00000517470 480 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 MED28P6-201ENST00000558776 231 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 MIR8076-201ENST00000611401 83 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 AL159153.1-201ENST00000619688 317 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 UBE3AP2-201ENST00000429033 2259 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.19-201ENST00000362462 99 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-770P-201ENST00000363929 105 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.471-201ENST00000384312 102 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 MT-TW-201ENST00000387382 68 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 RNU2-38P-201ENST00000410856 79 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 Z85995.1-201ENST00000415547 335 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC007560.1-201ENST00000426912 237 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AL627311.1-201ENST00000431514 115 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 SNORD127-201ENST00000458892 86 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 snoU13.4-201ENST00000458916 104 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 RPL23AP45-201ENST00000476406 468 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 RPS29P2-201ENST00000479278 136 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 RPL21P13-201ENST00000488305 481 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 RNA5SP164-201ENST00000516533 110 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC107016.1-201ENST00000550463 337 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC103996.1-201ENST00000555468 102 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AL161629.2-201ENST00000615347 275 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40BQ6NWY9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.64-201ENST00000362845 102 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-595P-201ENST00000363944 107 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.376-201ENST00000365638 108 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.515-201ENST00000384535 112 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 MTND3P9-201ENST00000429526 346 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 MYL8P-204ENST00000431574 518 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 RN7SL601P-201ENST00000471221 293 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AC109479.2-201ENST00000517842 174 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AC091144.1-201ENST00000519573 138 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AC025755.1-201ENST00000521306 278 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AC090281.1-201ENST00000523019 276 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AL645944.1-201ENST00000603857 493 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 IPO8P1-201ENST00000455509 3109 ntBASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF40BQ6NWY9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 MFSD8-236ENST00000641509 4050 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 SNORA20.1-201ENST00000364790 130 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-741P-201ENST00000383889 107 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-1026P-201ENST00000384465 108 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 U3.42-201ENST00000408746 214 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 TOMM22P1-201ENST00000418578 312 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 PIGFP3-201ENST00000441918 722 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 AC008155.2-201ENST00000464337 397 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 RPL39P38-201ENST00000467018 153 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-911P-201ENST00000516523 104 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-570P-201ENST00000517051 105 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 MIR3128-201ENST00000581957 66 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 AC096772.1-201ENST00000609146 564 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 AL355810.1-201ENST00000614629 552 ntBASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF40BQ6NWY9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms