Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMEM259Q4ZIN3 AL445487.1-201ENST00000415694 1580 ntBASIC4.95□□□□□ -1.62
TMEM259Q4ZIN3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMEM259Q4ZIN3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMEM259Q4ZIN3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AC008725.1-201ENST00000605123 2263 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 RNA5SP197-201ENST00000363357 119 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 Y_RNA.170-201ENST00000363746 110 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 SNORA56-201ENST00000383966 129 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 RNU6-793P-201ENST00000384233 104 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 U3.32-201ENST00000408116 212 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 RNA5SP146-201ENST00000410743 123 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AL590139.1-201ENST00000416267 400 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AC000111.2-201ENST00000448200 210 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AC091868.1-201ENST00000508746 304 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 RNA5SP392-201ENST00000516905 112 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 BPIFA4P-203ENST00000603168 689 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AL391358.1-201ENST00000605342 190 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 AC004467.1-201ENST00000615678 330 ntBASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TMEM259Q4ZIN3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC002543.1-201ENST00000299783 1954 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC099654.7-201ENST00000635788 2127 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 RNA5SP28-201ENST00000363841 119 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 MIR208B-201ENST00000401172 77 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 MIR320B2-201ENST00000408479 138 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 RN7SKP100-201ENST00000411258 284 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AL591419.1-201ENST00000427423 339 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 RPL23AP82-202ENST00000427528 469 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 RPL23AP56-201ENST00000460778 453 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 RPS17P2-201ENST00000461663 408 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC107626.1-201ENST00000471084 183 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 IGKV1-32-201ENST00000519290 311 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC091042.1-201ENST00000579213 173 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 MIR4270-201ENST00000581799 70 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AL162713.1-201ENST00000604480 262 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 uc_338.18-201ENST00000615451 175 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 SNORD98-201ENST00000636377 67 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AC139713.2-215ENST00000641428 5037 ntBASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TMEM259Q4ZIN3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 BX322639.1-202ENST00000423987 2213 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AC073073.2-201ENST00000609827 2578 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 Y_RNA.8-201ENST00000362353 102 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 RNA5SP191-201ENST00000362585 102 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 RNU6-1310P-201ENST00000384153 107 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 SNORA1.3-201ENST00000384676 136 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 U3.26-201ENST00000391236 204 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AL591034.1-201ENST00000407447 340 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 RPS29P33-201ENST00000456717 146 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 SNORD2.1-201ENST00000458762 69 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AC007215.1-201ENST00000464893 276 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 RPS29P26-201ENST00000477483 171 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AIG1P1-201ENST00000503376 148 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AP005660.1-201ENST00000522972 293 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 CYP4A27P-201ENST00000567218 190 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 AC104465.1-201ENST00000611365 139 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 MFSD8-216ENST00000641147 4009 ntBASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMEM259Q4ZIN3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMEM259Q4ZIN3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.91□□□□□ -1.62
TMEM259Q4ZIN3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.91□□□□□ -1.62
TMEM259Q4ZIN3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.91□□□□□ -1.62
TMEM259Q4ZIN3 TLK1P1-201ENST00000456760 2440 ntBASIC4.91□□□□□ -1.62
TMEM259Q4ZIN3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TMEM259Q4ZIN3 Y_RNA.101-201ENST00000363154 102 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms