Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 MTAPP1-201ENST00000489154 819 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 EIF4EP3-201ENST00000498782 656 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 FAM92A1P2-202ENST00000504766 877 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC96Q2M329 SNORD19.2-201ENST00000516978 73 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 BTF3P12-201ENST00000519620 469 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 AC109635.3-201ENST00000529536 185 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC96Q2M329 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC96Q2M329 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC96Q2M329 MIR4775-201ENST00000581168 75 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 MIR3605-201ENST00000583214 100 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 Z84480.1-201ENST00000605131 311 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 AC104458.1-201ENST00000608243 463 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC96Q2M329 ASNSP3-201ENST00000451989 1306 ntBASIC3.13□□□□□ -1.91
CCDC96Q2M329 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 SNORA38-201ENST00000363946 132 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 AL139397.2-201ENST00000404529 772 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 RPS4XP7-201ENST00000406274 780 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 AL353729.1-201ENST00000425044 720 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 MTND1P2-201ENST00000430604 821 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 AL606489.2-201ENST00000433886 234 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC104389.3-201ENST00000445629 235 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 RNU6-953P-201ENST00000459154 107 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 TRBV1-201ENST00000476502 284 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC116562.3-201ENST00000506136 177 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC117522.1-201ENST00000509821 380 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 SNORA31.15-201ENST00000516771 132 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 Y_RNA.704-201ENST00000516851 102 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC068587.5-201ENST00000528506 175 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 OR4R1P-201ENST00000529879 463 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 OR5B19P-201ENST00000531766 928 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC96Q2M329 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CCDC96Q2M329 MTND4P27-201ENST00000450813 1354 ntBASIC3.12□□□□□ -1.91
CCDC96Q2M329 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 RNU6-534P-201ENST00000364877 106 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 RNU6-61P-201ENST00000365528 109 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 SNORA24.1-201ENST00000384401 135 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 RNU2-9P-201ENST00000410194 145 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 MTND1P23-201ENST00000416931 372 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 MTCO1P20-201ENST00000425366 358 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC093106.2-201ENST00000428212 385 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AL596276.1-201ENST00000434465 418 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 RPL7P54-201ENST00000438336 674 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC96Q2M329 CACYBPP2-201ENST00000453625 678 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 RNU6-261P-201ENST00000459506 102 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 MRPL42P6-201ENST00000486397 371 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC096725.1-201ENST00000514266 313 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AP005435.4-201ENST00000529514 284 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC021739.1-201ENST00000559631 174 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 MIR4635-201ENST00000583759 79 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC008752.3-201ENST00000588113 712 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 BNIP3P30-201ENST00000601184 574 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AL391813.1-201ENST00000603098 260 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC092608.2-201ENST00000624427 218 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC103710.2-202ENST00000641454 2853 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 AC006020.1-201ENST00000420179 1854 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC96Q2M329 Z82195.2-201ENST00000612348 18351 ntBASIC3.11□□□□□ -1.91
CCDC96Q2M329 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC96Q2M329 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC96Q2M329 MIR449A-201ENST00000362113 91 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 Y_RNA.89-201ENST00000363031 102 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC96Q2M329 RNU6-658P-201ENST00000384606 106 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AL139039.1-201ENST00000401900 692 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms