Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RNU6-273P-201ENST00000516937 96 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 RNA5SP454-201ENST00000517231 127 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
EFNB3Q15768 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.82□□□□□ -1.96
EFNB3Q15768 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.82□□□□□ -1.96
EFNB3Q15768 DNAJC8P1-201ENST00000554535 372 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 RPS3AP23-202ENST00000574601 686 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.82□□□□□ -1.96
EFNB3Q15768 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.82□□□□□ -1.96
EFNB3Q15768 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.82□□□□□ -1.96
EFNB3Q15768 C8orf59P2-201ENST00000603441 271 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 AC004832.5-201ENST00000608677 401 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 MIR8057-201ENST00000620957 69 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 Z69720.2-201ENST00000624755 279 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 SCARNA4-202ENST00000625402 129 ntBASIC2.82□□□□□ -1.96
EFNB3Q15768 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
EFNB3Q15768 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
EFNB3Q15768 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
EFNB3Q15768 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
EFNB3Q15768 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
EFNB3Q15768 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.81□□□□□ -1.96
EFNB3Q15768 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
EFNB3Q15768 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.81□□□□□ -1.96
EFNB3Q15768 AC138393.1-203ENST00000327086 343 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 RNU6-562P-201ENST00000362731 107 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 Z98749.2-208ENST00000381646 500 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
EFNB3Q15768 SNORD116-11-201ENST00000383882 92 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 Y_RNA.529-201ENST00000384586 119 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 RNA5SP31-201ENST00000411144 127 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.81□□□□□ -1.96
EFNB3Q15768 ATG3P1-201ENST00000419507 911 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 BPY2DP-201ENST00000422208 265 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 UBE2V1P4-201ENST00000425374 344 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.81□□□□□ -1.96
EFNB3Q15768 BTF3P15-201ENST00000455606 336 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AC006026.2-201ENST00000457376 180 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AC008526.1-201ENST00000509149 338 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AC113155.1-201ENST00000511141 769 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 RPL39P5-202ENST00000512505 151 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.81□□□□□ -1.96
EFNB3Q15768 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 RN7SKP282-201ENST00000516824 299 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 RNU6-1088P-201ENST00000516850 104 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.81□□□□□ -1.96
EFNB3Q15768 AC025423.5-201ENST00000550230 219 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AC007151.1-201ENST00000572774 483 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 MIR3200-201ENST00000580767 85 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AC012493.2-201ENST00000595083 291 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 MTND4LP5-201ENST00000605152 292 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 MIR6134-201ENST00000617606 109 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AC091953.5-201ENST00000622919 233 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 AL133216.2-202ENST00000634512 349 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
EFNB3Q15768 ZNF519P1-201ENST00000449011 1626 ntBASIC2.81□□□□□ -1.96
EFNB3Q15768 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
EFNB3Q15768 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
EFNB3Q15768 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
EFNB3Q15768 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
EFNB3Q15768 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
EFNB3Q15768 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
EFNB3Q15768 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.8□□□□□ -1.96
EFNB3Q15768 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
EFNB3Q15768 AC093908.1-201ENST00000623125 8092 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
EFNB3Q15768 CD24P4-201ENST00000382840 243 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 RNU6-72P-201ENST00000384285 79 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 RNA5SP252-201ENST00000391131 119 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 MIR548K-201ENST00000408406 116 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 U3.37-201ENST00000408528 213 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
EFNB3Q15768 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.8□□□□□ -1.96
EFNB3Q15768 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
EFNB3Q15768 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.8□□□□□ -1.96
EFNB3Q15768 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.8□□□□□ -1.96
EFNB3Q15768 MTND1P17-201ENST00000448961 204 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AC107399.1-201ENST00000451226 265 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
EFNB3Q15768 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.8□□□□□ -1.96
EFNB3Q15768 AC021205.2-201ENST00000480069 347 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AC092185.1-201ENST00000491371 97 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 Y_RNA.682-201ENST00000516457 100 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.8□□□□□ -1.96
EFNB3Q15768 COPS8P3-201ENST00000526024 482 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AP005597.4-201ENST00000526762 229 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AC026371.1-201ENST00000551867 419 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.8□□□□□ -1.96
EFNB3Q15768 AC138761.3-201ENST00000579993 334 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.8□□□□□ -1.96
EFNB3Q15768 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.8□□□□□ -1.96
EFNB3Q15768 AC008121.1-201ENST00000603244 268 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AL162713.1-201ENST00000604480 262 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AC069234.5-201ENST00000611056 416 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 uc_338.1-201ENST00000612113 180 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AC004852.3-201ENST00000614131 326 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 AL359697.1-201ENST00000624879 587 ntBASIC2.8□□□□□ -1.96
EFNB3Q15768 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.8□□□□□ -1.96
EFNB3Q15768 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
EFNB3Q15768 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms