Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH1Q08174 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH1Q08174 AC072026.1-201ENST00000605023 201 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PCDH1Q08174 SNORA43.4-201ENST00000629559 138 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 AC132825.6-201ENST00000638861 357 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PCDH1Q08174 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PCDH1Q08174 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDH1Q08174 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PCDH1Q08174 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 SNORA25.1-201ENST00000362326 128 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 RNU5B-2P-201ENST00000363036 113 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 RNU1-73P-201ENST00000383971 164 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 U8.10-201ENST00000384260 133 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 MTHFD2P2-201ENST00000407725 247 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDH1Q08174 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDH1Q08174 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDH1Q08174 HMGN2P30-201ENST00000423237 256 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 AL356535.1-201ENST00000440335 398 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDH1Q08174 RPL37P4-201ENST00000448908 268 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDH1Q08174 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 RN7SL812P-201ENST00000493791 279 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 RPL7P47-201ENST00000497299 556 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 MIR5695-201ENST00000579717 85 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDH1Q08174 AL590392.1-201ENST00000604960 446 ntBASIC4.26□□□□□ -1.73
PCDH1Q08174 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH1Q08174 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH1Q08174 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PCDH1Q08174 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH1Q08174 SRP72P2-201ENST00000344851 1979 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH1Q08174 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH1Q08174 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH1Q08174 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.25□□□□□ -1.73
PCDH1Q08174 SNORD56.1-201ENST00000362913 68 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RNU6-1159P-201ENST00000362933 107 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 Y_RNA.275-201ENST00000364726 110 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RNU1-140P-201ENST00000365040 165 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RNU6-47P-201ENST00000383866 107 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RNU6-514P-201ENST00000384208 107 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RNU6-281P-201ENST00000384212 103 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 MIR129-1-201ENST00000384972 72 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 MIR141-201ENST00000384975 95 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 MIR548I2-201ENST00000408348 149 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 Y_RNA.590-201ENST00000410140 107 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RNU2-61P-201ENST00000411069 191 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH1Q08174 WARS2P1-201ENST00000429678 537 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 NDUFB4P6-201ENST00000436819 366 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 ABCF2P2-201ENST00000450549 296 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RN7SL354P-201ENST00000469282 294 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 AC117440.1-201ENST00000474107 571 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 AC109925.1-201ENST00000478069 331 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 AC078918.1-201ENST00000498515 228 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH1Q08174 AC074198.2-201ENST00000508153 258 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 PPBPP1-201ENST00000510807 373 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RNA5SP154-201ENST00000516193 111 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 Y_RNA.679-201ENST00000516416 91 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 Vault.1-201ENST00000516474 102 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 RAB9BP1-201ENST00000519581 626 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 AL138721.1-201ENST00000616756 179 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 MIR6134-201ENST00000617606 109 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
PCDH1Q08174 AP005019.3-201ENST00000620418 560 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 MIR6810-201ENST00000622701 70 ntBASIC4.25□□□□□ -1.73
PCDH1Q08174 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH1Q08174 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH1Q08174 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH1Q08174 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PCDH1Q08174 RAD17P1-201ENST00000418130 2042 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
PCDH1Q08174 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH1Q08174 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH1Q08174 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms