Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC116655.1-201ENST00000508324 901 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.13□□□□□ -1.91
UBE3AQ05086 AC104027.1-201ENST00000521887 300 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBE3AQ05086 MIR4424-201ENST00000585257 86 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC020895.1-201ENST00000595362 272 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3AQ05086 AC091152.3-201ENST00000604227 325 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 U2.17-201ENST00000611454 95 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC090517.2-201ENST00000614966 680 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3AQ05086 FER-210ENST00000628534 558 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3AQ05086 IGHVIII-44-202ENST00000636235 289 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
UBE3AQ05086 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBE3AQ05086 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
UBE3AQ05086 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBE3AQ05086 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 RNY4P14-201ENST00000363656 96 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 RNU6-1303P-201ENST00000364841 107 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
UBE3AQ05086 Y_RNA.399-201ENST00000383955 105 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 SNORA18.3-201ENST00000384122 132 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 RNU6-72P-201ENST00000384285 79 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 RNU6-19P-201ENST00000384718 107 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 RNU6-908P-201ENST00000410160 94 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 Y_RNA.599-201ENST00000410489 109 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 RNU6-1068P-201ENST00000410958 103 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3AQ05086 PTGES3P4-201ENST00000426243 356 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.12□□□□□ -1.91
UBE3AQ05086 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3AQ05086 OSTCP8-201ENST00000445117 448 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3AQ05086 RN7SL283P-201ENST00000489055 303 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 SEM1P1-201ENST00000506694 209 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 SNORD60.2-201ENST00000516883 86 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
UBE3AQ05086 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3AQ05086 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBE3AQ05086 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.12□□□□□ -1.91
UBE3AQ05086 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3AQ05086 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE3AQ05086 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3AQ05086 AC104984.5-201ENST00000586878 94 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE3AQ05086 AL391813.1-201ENST00000603098 260 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 Z82243.1-201ENST00000609432 473 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 DISC2.1-201ENST00000612827 205 ntBASIC3.12□□□□□ -1.91
UBE3AQ05086 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
UBE3AQ05086 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE3AQ05086 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UBE3AQ05086 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE3AQ05086 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 RNU1-100P-201ENST00000365255 165 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 Y_RNA.480-201ENST00000384364 102 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 RAP1BP3-201ENST00000407180 549 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE3AQ05086 CYCSP33-201ENST00000414485 327 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 OOSP1P1-201ENST00000423265 274 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 UBE2V1P8-201ENST00000437166 265 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AL121601.2-201ENST00000438019 707 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 RNU7-167P-201ENST00000459160 62 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 MTCO3P38-201ENST00000468910 766 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 MTAPP1-201ENST00000489154 819 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.11□□□□□ -1.91
UBE3AQ05086 GZMAP1-201ENST00000503054 631 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 CCDC34P1-201ENST00000507441 517 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AC079140.5-201ENST00000507882 310 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.11□□□□□ -1.91
UBE3AQ05086 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE3AQ05086 RNU6-718P-201ENST00000516166 105 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 ACA59.2-201ENST00000517061 156 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE3AQ05086 AP004607.1-201ENST00000524456 203 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 MTND1P35-201ENST00000526739 508 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AP003033.1-201ENST00000527244 415 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 MTCO3P23-201ENST00000561363 289 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AL138976.2-201ENST00000563989 694 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AC010620.2-201ENST00000600135 313 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE3AQ05086 AC011890.2-201ENST00000613393 294 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 AC026585.1-201ENST00000619582 524 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 SCARNA4-202ENST00000625402 129 ntBASIC3.11□□□□□ -1.91
UBE3AQ05086 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBE3AQ05086 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE3AQ05086 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE3AQ05086 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
UBE3AQ05086 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE3AQ05086 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBE3AQ05086 AC004520.1-201ENST00000608362 1413 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
UBE3AQ05086 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBE3AQ05086 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
UBE3AQ05086 Y_RNA.38-201ENST00000362617 102 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 RNU6-38P-201ENST00000384085 107 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms