Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPL39P62891 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPL39P62891 MTND4LP24-201ENST00000572277 291 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 AL009028.1-201ENST00000604895 802 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPL39P62891 AL391834.1-201ENST00000609609 560 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
RPL39P62891 MIR2909-201ENST00000617113 69 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 AC006213.5-201ENST00000619673 288 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 SNORD12-201ENST00000391002 90 ntBASIC-0.52□□□□□ -2.49
RPL39P62891 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
RPL39P62891 OFD1P18Y-201ENST00000420889 959 ntBASIC-0.52□□□□□ -2.49
RPL39P62891 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPL39P62891 AL035398.1-201ENST00000430869 322 ntBASIC-0.52□□□□□ -2.49
RPL39P62891 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPL39P62891 AC002429.1-201ENST00000437672 148 ntBASIC-0.52□□□□□ -2.49
RPL39P62891 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPL39P62891 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPL39P62891 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPL39P62891 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPL39P62891 MTND1P22-201ENST00000510572 951 ntBASIC-0.52□□□□□ -2.49
RPL39P62891 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC-0.52□□□□□ -2.49
RPL39P62891 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.52□□□□□ -2.49
RPL39P62891 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.53□□□□□ -2.49
RPL39P62891 MIR103A1-201ENST00000362165 78 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 RNA5SP62-201ENST00000363457 110 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 RNA5SP128-201ENST00000365305 116 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 SNORA48.1-201ENST00000390879 135 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 MTND4LP21-201ENST00000415303 295 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC-0.53□□□□□ -2.49
RPL39P62891 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 AL583843.1-201ENST00000456070 346 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 RNU7-27P-201ENST00000459281 62 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 HMGN1P12-201ENST00000499125 195 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 AC105758.1-201ENST00000506038 399 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.53□□□□□ -2.49
RPL39P62891 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.53□□□□□ -2.49
RPL39P62891 AP000860.1-201ENST00000605250 559 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 AC024257.5-201ENST00000612739 531 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 RNU6-156P-201ENST00000621869 107 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 AC091965.5-201ENST00000624785 342 ntBASIC-0.53□□□□□ -2.49
RPL39P62891 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC-0.54□□□□□ -2.5
RPL39P62891 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
RPL39P62891 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
RPL39P62891 UBE2Q2P1-202ENST00000354771 883 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 MIR597-201ENST00000384968 97 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 RNU6-750P-201ENST00000390946 107 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 AC098592.2-201ENST00000413158 265 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 MTCO3P4-201ENST00000419236 787 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 NCOR1P3-201ENST00000420479 303 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.54□□□□□ -2.5
RPL39P62891 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC-0.54□□□□□ -2.5
RPL39P62891 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.54□□□□□ -2.5
RPL39P62891 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 RNU6-320P-201ENST00000516511 106 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.54□□□□□ -2.5
RPL39P62891 MTCYBP27-201ENST00000555160 670 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC-0.54□□□□□ -2.5
RPL39P62891 AC007151.1-201ENST00000572774 483 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 AC011712.1-201ENST00000588959 234 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 AL590240.4-201ENST00000616908 390 ntBASIC-0.54□□□□□ -2.5
RPL39P62891 AL159152.1-201ENST00000635019 2587 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AL356776.1-201ENST00000406574 447 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AL160275.3-201ENST00000423876 471 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.55□□□□□ -2.5
RPL39P62891 RPL26P26-201ENST00000480251 434 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 LARP1BP2-201ENST00000486594 519 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AC018868.1-201ENST00000491307 315 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AC114786.4-201ENST00000508771 728 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AC114797.1-201ENST00000514003 728 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.55□□□□□ -2.5
RPL39P62891 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.55□□□□□ -2.5
RPL39P62891 ZNF92P3-201ENST00000596594 954 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 ELOCP5-201ENST00000604924 333 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AC015849.6-201ENST00000605454 474 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.55□□□□□ -2.5
RPL39P62891 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 MIR1295B-201ENST00000636144 60 ntBASIC-0.55□□□□□ -2.5
RPL39P62891 RNU6-877P-201ENST00000383868 107 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 MIR561-201ENST00000385216 97 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 MIR644A-201ENST00000385262 94 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 AL022400.1-201ENST00000423946 935 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 MTCO3P18-201ENST00000440206 761 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPL39P62891 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC-0.56□□□□□ -2.5
RPL39P62891 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPL39P62891 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPL39P62891 AP1S2P1-201ENST00000457344 379 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 AC010409.1-201ENST00000487382 476 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 MTCO3P7-201ENST00000510008 774 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 RN7SKP287-201ENST00000516546 266 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 RNA5SP330-201ENST00000517096 96 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.56□□□□□ -2.5
RPL39P62891 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPL39P62891 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPL39P62891 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPL39P62891 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.56□□□□□ -2.5
RPL39P62891 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms