Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC008945.2-201ENST00000606056 604 ntBASIC0.55□□□□□ -2.32
RPS28P62857 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC0.55□□□□□ -2.32
RPS28P62857 LINC02555-201ENST00000563933 1951 ntBASIC0.55□□□□□ -2.32
RPS28P62857 MTND4P16-201ENST00000466108 1367 ntBASIC0.55□□□□□ -2.32
RPS28P62857 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
RPS28P62857 AC062016.1-201ENST00000355719 319 ntBASIC0.54□□□□□ -2.32
RPS28P62857 RNU6-487P-201ENST00000365430 104 ntBASIC0.54□□□□□ -2.32
RPS28P62857 RNU6-843P-201ENST00000384454 104 ntBASIC0.54□□□□□ -2.32
RPS28P62857 SNORA67.6-201ENST00000391093 99 ntBASIC0.54□□□□□ -2.32
RPS28P62857 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.54□□□□□ -2.32
RPS28P62857 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
RPS28P62857 AL023284.1-201ENST00000403956 276 ntBASIC0.54□□□□□ -2.32
RPS28P62857 CBX3P6-201ENST00000430257 527 ntBASIC0.54□□□□□ -2.32
RPS28P62857 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.54□□□□□ -2.32
RPS28P62857 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.54□□□□□ -2.32
RPS28P62857 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.54□□□□□ -2.32
RPS28P62857 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.54□□□□□ -2.32
RPS28P62857 SEPT14P24-201ENST00000447236 180 ntBASIC0.54□□□□□ -2.32
RPS28P62857 AL353705.4-201ENST00000449661 238 ntBASIC0.54□□□□□ -2.32
RPS28P62857 NUTF2P7-201ENST00000453086 375 ntBASIC0.54□□□□□ -2.32
RPS28P62857 RNU1-123P-201ENST00000458950 160 ntBASIC0.54□□□□□ -2.32
RPS28P62857 AC104563.1-201ENST00000476147 376 ntBASIC0.54□□□□□ -2.32
RPS28P62857 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
RPS28P62857 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.54□□□□□ -2.32
RPS28P62857 DNAJC19P3-201ENST00000594491 331 ntBASIC0.54□□□□□ -2.32
RPS28P62857 AC084768.2-201ENST00000622736 221 ntBASIC0.54□□□□□ -2.32
RPS28P62857 AC034229.5-201ENST00000624258 185 ntBASIC0.54□□□□□ -2.32
RPS28P62857 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.54□□□□□ -2.32
RPS28P62857 AC068647.2-201ENST00000637380 353 ntBASIC0.54□□□□□ -2.32
RPS28P62857 AP005901.5-201ENST00000545779 1796 ntBASIC0.53□□□□□ -2.32
RPS28P62857 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.53□□□□□ -2.32
RPS28P62857 Y_RNA.40-201ENST00000362645 93 ntBASIC0.53□□□□□ -2.32
RPS28P62857 SNORA64-201ENST00000384674 134 ntBASIC0.53□□□□□ -2.32
RPS28P62857 MIR583-201ENST00000384846 75 ntBASIC0.53□□□□□ -2.32
RPS28P62857 SNORD65.1-201ENST00000390889 71 ntBASIC0.53□□□□□ -2.32
RPS28P62857 RPS3AP25-201ENST00000411660 793 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AL590556.1-201ENST00000423231 483 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC010099.3-201ENST00000423896 409 ntBASIC0.53□□□□□ -2.32
RPS28P62857 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.53□□□□□ -2.32
RPS28P62857 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC0.53□□□□□ -2.32
RPS28P62857 MTND1P16-201ENST00000465177 898 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC0.53□□□□□ -2.32
RPS28P62857 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC0.53□□□□□ -2.32
RPS28P62857 SNORA31.3-201ENST00000516029 96 ntBASIC0.53□□□□□ -2.32
RPS28P62857 RNA5SP481-201ENST00000516814 122 ntBASIC0.53□□□□□ -2.32
RPS28P62857 RNA5SP437-201ENST00000517249 129 ntBASIC0.53□□□□□ -2.32
RPS28P62857 SUMO2P18-201ENST00000518873 252 ntBASIC0.53□□□□□ -2.32
RPS28P62857 HIGD1AP17-201ENST00000554576 276 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AL133153.1-201ENST00000557756 303 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.53□□□□□ -2.32
RPS28P62857 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
RPS28P62857 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.53□□□□□ -2.32
RPS28P62857 AC106785.1-201ENST00000565935 262 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC122134.1-202ENST00000569111 1201 ntBASIC0.53□□□□□ -2.32
RPS28P62857 MTCYBP33-201ENST00000575007 1130 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.53□□□□□ -2.32
RPS28P62857 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.53□□□□□ -2.32
RPS28P62857 AC008751.2-201ENST00000597885 980 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC022022.2-201ENST00000602989 360 ntBASIC0.53□□□□□ -2.32
RPS28P62857 BNIP3P9-201ENST00000603714 553 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC069114.2-201ENST00000604699 304 ntBASIC0.53□□□□□ -2.32
RPS28P62857 MIR7106-201ENST00000612419 65 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC135507.2-201ENST00000612443 309 ntBASIC0.53□□□□□ -2.32
RPS28P62857 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC0.53□□□□□ -2.32
RPS28P62857 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.53□□□□□ -2.32
RPS28P62857 AL157770.1-201ENST00000623049 439 ntBASIC0.53□□□□□ -2.32
RPS28P62857 TEX41-300ENST00000631048 69 ntTSL 5 BASIC0.53□□□□□ -2.32
RPS28P62857 AL512643.1-201ENST00000635735 524 ntBASIC0.53□□□□□ -2.32
RPS28P62857 RNU6-650P-201ENST00000365658 111 ntBASIC0.52□□□□□ -2.33
RPS28P62857 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RPS28P62857 RNU6-331P-201ENST00000384724 107 ntBASIC0.52□□□□□ -2.33
RPS28P62857 MIR608-201ENST00000384820 100 ntBASIC0.52□□□□□ -2.33
RPS28P62857 AL117342.1-201ENST00000404861 406 ntBASIC0.52□□□□□ -2.33
RPS28P62857 MIR1323-201ENST00000408090 73 ntBASIC0.52□□□□□ -2.33
RPS28P62857 RNU2-42P-201ENST00000410697 113 ntBASIC0.52□□□□□ -2.33
RPS28P62857 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.52□□□□□ -2.33
RPS28P62857 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.52□□□□□ -2.33
RPS28P62857 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC0.52□□□□□ -2.33
RPS28P62857 Z98742.3-201ENST00000418637 326 ntBASIC0.52□□□□□ -2.33
RPS28P62857 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.52□□□□□ -2.33
RPS28P62857 DEFB130D-201ENST00000426866 237 ntBASIC0.52□□□□□ -2.33
RPS28P62857 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC0.52□□□□□ -2.33
RPS28P62857 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.52□□□□□ -2.33
RPS28P62857 AC107083.1-201ENST00000439643 279 ntBASIC0.52□□□□□ -2.33
RPS28P62857 AC003989.2-201ENST00000440224 169 ntBASIC0.52□□□□□ -2.33
RPS28P62857 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.52□□□□□ -2.33
RPS28P62857 MTND4P25-201ENST00000441039 533 ntBASIC0.52□□□□□ -2.33
RPS28P62857 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.52□□□□□ -2.33
RPS28P62857 AL353752.1-201ENST00000454946 260 ntBASIC0.52□□□□□ -2.33
RPS28P62857 RNU1-131P-201ENST00000458943 161 ntBASIC0.52□□□□□ -2.33
RPS28P62857 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
RPS28P62857 HMGB1P30-201ENST00000492455 606 ntBASIC0.52□□□□□ -2.33
RPS28P62857 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
RPS28P62857 HMGB1P28-201ENST00000507778 552 ntBASIC0.52□□□□□ -2.33
RPS28P62857 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.52□□□□□ -2.33
RPS28P62857 RNU6-583P-201ENST00000516012 92 ntBASIC0.52□□□□□ -2.33
RPS28P62857 RNU6-351P-201ENST00000516097 100 ntBASIC0.52□□□□□ -2.33
RPS28P62857 RNA5SP490-201ENST00000517141 136 ntBASIC0.52□□□□□ -2.33
RPS28P62857 SNORA70.22-201ENST00000517160 124 ntBASIC0.52□□□□□ -2.33
RPS28P62857 AC090142.3-201ENST00000519012 385 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms