Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC092447.10-201ENST00000620607 1652 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CKS1BP61024 MTND5P35-201ENST00000557537 1720 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 AL391987.6-201ENST00000305671 199 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 RNU6-1010P-201ENST00000362757 107 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.62□□□□□ -2.31
CKS1BP61024 RNU6-296P-201ENST00000384608 107 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 MIR23A-201ENST00000385245 73 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 RNU6-360P-201ENST00000390944 104 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 RNU6-575P-201ENST00000411326 105 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.62□□□□□ -2.31
CKS1BP61024 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.62□□□□□ -2.31
CKS1BP61024 AL121890.1-201ENST00000435457 205 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.62□□□□□ -2.31
CKS1BP61024 AL163195.1-201ENST00000496941 348 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 AC108210.2-201ENST00000503681 201 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 AC093259.1-201ENST00000509755 300 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 CYCSP23-201ENST00000519781 313 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 AL353997.5-201ENST00000618886 171 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 AL136313.1-201ENST00000624804 202 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.62□□□□□ -2.31
CKS1BP61024 AC068205.3-201ENST00000636385 468 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 U6.99-201ENST00000637524 83 ntBASIC0.62□□□□□ -2.31
CKS1BP61024 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CKS1BP61024 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CKS1BP61024 RNU6-529P-201ENST00000363383 104 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.61□□□□□ -2.31
CKS1BP61024 MIR515-2-201ENST00000384883 83 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 MIR515-1-201ENST00000384884 83 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 MIR186-201ENST00000384988 86 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 RNA5SP213-201ENST00000391031 106 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 RPL23AP32-201ENST00000395315 459 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.61□□□□□ -2.31
CKS1BP61024 AC004965.1-201ENST00000413033 213 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.61□□□□□ -2.31
CKS1BP61024 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.61□□□□□ -2.31
CKS1BP61024 MTND4LP14-201ENST00000429447 288 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC092427.1-201ENST00000439177 601 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 BRK1P2-201ENST00000442875 223 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 MTCO3P45-201ENST00000443036 613 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 MTND2P4-201ENST00000445034 1004 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AL096829.2-201ENST00000446582 742 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 SNRPFP4-201ENST00000456366 242 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 RPS3AP22-201ENST00000488297 769 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC145146.1-201ENST00000496370 254 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC103851.1-201ENST00000506833 274 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 RNU6-714P-201ENST00000516963 103 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.61□□□□□ -2.31
CKS1BP61024 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.61□□□□□ -2.31
CKS1BP61024 AL512310.8-201ENST00000550183 120 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC015688.6-201ENST00000577737 104 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC009977.1-201ENST00000586015 570 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC008759.3-201ENST00000613300 508 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 AC130454.1-201ENST00000622948 401 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 MIR1322-201ENST00000638013 71 ntBASIC0.61□□□□□ -2.31
CKS1BP61024 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CKS1BP61024 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CKS1BP61024 MIR378A-201ENST00000362177 66 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 SNORD114-2-201ENST00000363953 78 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 DHFRP6-201ENST00000401776 268 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.6□□□□□ -2.31
CKS1BP61024 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.6□□□□□ -2.31
CKS1BP61024 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.6□□□□□ -2.31
CKS1BP61024 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.6□□□□□ -2.31
CKS1BP61024 AC132479.1-201ENST00000449160 144 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.6□□□□□ -2.31
CKS1BP61024 FDX1P2-201ENST00000450769 375 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.6□□□□□ -2.31
CKS1BP61024 HMGN2P9-201ENST00000476875 229 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.6□□□□□ -2.31
CKS1BP61024 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.6□□□□□ -2.31
CKS1BP61024 AL731537.2-201ENST00000561565 951 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 MIR4782-201ENST00000577987 79 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 AP003465.2-201ENST00000602571 373 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 MZT1P2-201ENST00000604387 248 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.6□□□□□ -2.31
CKS1BP61024 AC009269.6-201ENST00000621778 588 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 AC093648.1-201ENST00000623546 606 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 AC091895.1-201ENST00000624494 256 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 OR4G3P-201ENST00000633500 913 ntBASIC0.6□□□□□ -2.31
CKS1BP61024 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CKS1BP61024 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.59□□□□□ -2.31
CKS1BP61024 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.59□□□□□ -2.31
CKS1BP61024 AL139397.2-201ENST00000404529 772 ntBASIC0.59□□□□□ -2.31
CKS1BP61024 SNORA11.2-201ENST00000408318 127 ntBASIC0.59□□□□□ -2.31
CKS1BP61024 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.59□□□□□ -2.31
CKS1BP61024 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.59□□□□□ -2.31
CKS1BP61024 C8orf59P1-201ENST00000429930 303 ntBASIC0.59□□□□□ -2.31
CKS1BP61024 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.59□□□□□ -2.31
CKS1BP61024 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.59□□□□□ -2.31
CKS1BP61024 RPS27P1-201ENST00000450552 247 ntBASIC0.59□□□□□ -2.31
CKS1BP61024 AC136628.3-201ENST00000521868 290 ntBASIC0.59□□□□□ -2.31
CKS1BP61024 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.59□□□□□ -2.31
CKS1BP61024 MTCO2P2-201ENST00000591258 225 ntBASIC0.59□□□□□ -2.31
CKS1BP61024 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
CKS1BP61024 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
CKS1BP61024 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CKS1BP61024 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms