Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.04□□□□□ -1.76
MRE11P49959 AC012119.1-201ENST00000603184 222 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AC011890.2-201ENST00000613393 294 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AC007485.1-201ENST00000616755 206 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AC073476.4-201ENST00000628409 72 ntBASIC4.04□□□□□ -1.76
MRE11P49959 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRE11P49959 AL672296.1-201ENST00000427780 2158 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.04□□□□□ -1.76
MRE11P49959 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MRE11P49959 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
MRE11P49959 AL049781.1-201ENST00000623195 3585 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AC004925.1-201ENST00000624256 2706 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AL365440.1-201ENST00000436135 2167 ntBASIC4.03□□□□□ -1.76
MRE11P49959 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MRE11P49959 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRE11P49959 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.03□□□□□ -1.76
MRE11P49959 RNA5SP97-201ENST00000365006 84 ntBASIC4.03□□□□□ -1.76
MRE11P49959 RNU6-76P-201ENST00000384060 104 ntBASIC4.03□□□□□ -1.76
MRE11P49959 RNU6-45P-201ENST00000384471 107 ntBASIC4.03□□□□□ -1.76
MRE11P49959 MIR548F4-201ENST00000408515 105 ntBASIC4.03□□□□□ -1.76
MRE11P49959 MIR1261-201ENST00000408659 82 ntBASIC4.03□□□□□ -1.76
MRE11P49959 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.03□□□□□ -1.76
MRE11P49959 AC080125.1-201ENST00000414888 684 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AL139247.1-201ENST00000422768 325 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.03□□□□□ -1.76
MRE11P49959 AL359672.1-201ENST00000442302 409 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AC009901.1-201ENST00000506703 541 ntBASIC4.03□□□□□ -1.76
MRE11P49959 SNORA25.10-201ENST00000515926 124 ntBASIC4.03□□□□□ -1.76
MRE11P49959 RNU6-840P-201ENST00000517275 65 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AC087854.1-201ENST00000519706 414 ntBASIC4.03□□□□□ -1.76
MRE11P49959 COX6CP5-201ENST00000527162 228 ntBASIC4.03□□□□□ -1.76
MRE11P49959 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.03□□□□□ -1.76
MRE11P49959 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.03□□□□□ -1.76
MRE11P49959 AC026371.1-201ENST00000551867 419 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AC005951.2-201ENST00000576282 495 ntBASIC4.03□□□□□ -1.76
MRE11P49959 MIR4503-201ENST00000582187 83 ntBASIC4.03□□□□□ -1.76
MRE11P49959 MIR4672-201ENST00000583126 81 ntBASIC4.03□□□□□ -1.76
MRE11P49959 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.03□□□□□ -1.76
MRE11P49959 AC087588.2-201ENST00000617667 426 ntBASIC4.03□□□□□ -1.76
MRE11P49959 U6.98-201ENST00000637157 84 ntBASIC4.03□□□□□ -1.76
MRE11P49959 AP000553.6-201ENST00000641242 118 ntBASIC4.03□□□□□ -1.76
MRE11P49959 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRE11P49959 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 ZNF807-201ENST00000328088 1707 ntBASIC4.02□□□□□ -1.77
MRE11P49959 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MRE11P49959 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MRE11P49959 RPL21P3-201ENST00000395517 478 ntBASIC4.02□□□□□ -1.77
MRE11P49959 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.02□□□□□ -1.77
MRE11P49959 MTCYBP9-201ENST00000431021 303 ntBASIC4.02□□□□□ -1.77
MRE11P49959 SETP5-201ENST00000437270 562 ntBASIC4.02□□□□□ -1.77
MRE11P49959 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 BTF3P15-201ENST00000455606 336 ntBASIC4.02□□□□□ -1.77
MRE11P49959 AC146507.2-201ENST00000460608 476 ntBASIC4.02□□□□□ -1.77
MRE11P49959 AC107934.2-201ENST00000518653 310 ntBASIC4.02□□□□□ -1.77
MRE11P49959 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.02□□□□□ -1.77
MRE11P49959 BNIP3P16-201ENST00000589779 534 ntBASIC4.02□□□□□ -1.77
MRE11P49959 AC006006.1-201ENST00000603082 144 ntBASIC4.02□□□□□ -1.77
MRE11P49959 AC006023.1-201ENST00000603944 259 ntBASIC4.02□□□□□ -1.77
MRE11P49959 YPEL5P2-201ENST00000605553 359 ntBASIC4.02□□□□□ -1.77
MRE11P49959 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 AC005014.2-201ENST00000607795 599 ntBASIC4.02□□□□□ -1.77
MRE11P49959 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.02□□□□□ -1.77
MRE11P49959 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
MRE11P49959 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.01□□□□□ -1.77
MRE11P49959 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
MRE11P49959 OR56A5-201ENST00000340110 738 ntBASIC4.01□□□□□ -1.77
MRE11P49959 SNORD62.1-201ENST00000362541 86 ntBASIC4.01□□□□□ -1.77
MRE11P49959 RNU6-371P-201ENST00000364283 108 ntBASIC4.01□□□□□ -1.77
MRE11P49959 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.01□□□□□ -1.77
MRE11P49959 MTCYBP10-201ENST00000424905 650 ntBASIC4.01□□□□□ -1.77
MRE11P49959 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.01□□□□□ -1.77
MRE11P49959 RPL12P25-201ENST00000455592 494 ntBASIC4.01□□□□□ -1.77
MRE11P49959 RPL21P41-201ENST00000459863 264 ntBASIC4.01□□□□□ -1.77
MRE11P49959 RPL37P6-201ENST00000460682 294 ntBASIC4.01□□□□□ -1.77
MRE11P49959 RN7SL594P-201ENST00000470590 287 ntBASIC4.01□□□□□ -1.77
MRE11P49959 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.01□□□□□ -1.77
MRE11P49959 AC096745.1-201ENST00000509945 370 ntBASIC4.01□□□□□ -1.77
MRE11P49959 RNU6-1073P-201ENST00000517182 106 ntBASIC4.01□□□□□ -1.77
MRE11P49959 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.01□□□□□ -1.77
MRE11P49959 AC007458.1-201ENST00000542812 373 ntBASIC4.01□□□□□ -1.77
MRE11P49959 AC025423.5-201ENST00000550230 219 ntBASIC4.01□□□□□ -1.77
MRE11P49959 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.01□□□□□ -1.77
MRE11P49959 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
MRE11P49959 AC002044.1-201ENST00000606707 158 ntBASIC4.01□□□□□ -1.77
MRE11P49959 MIR15A-201ENST00000607334 83 ntBASIC4.01□□□□□ -1.77
MRE11P49959 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.01□□□□□ -1.77
MRE11P49959 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MRE11P49959 AC002546.1-201ENST00000588041 2504 ntBASIC4.01□□□□□ -1.77
MRE11P49959 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MRE11P49959 AC008264.2-201ENST00000610193 3731 ntBASIC4.01□□□□□ -1.77
MRE11P49959 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MRE11P49959 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
MRE11P49959 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4□□□□□ -1.77
MRE11P49959 AL353743.1-202ENST00000431724 1695 ntBASIC4□□□□□ -1.77
MRE11P49959 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
MRE11P49959 AC091152.2-201ENST00000591628 2569 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms