Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR4765-201ENST00000585007 77 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.72□□□□□ -1.97
HNF4AP41235 AP000787.2-201ENST00000604432 568 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AL354950.2-201ENST00000617939 290 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
HNF4AP41235 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
HNF4AP41235 AC073343.1-201ENST00000328239 651 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 RNU6-288P-201ENST00000363690 104 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 RNU4-48P-201ENST00000365559 182 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 RNY3P14-201ENST00000384309 102 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 SNORA24.1-201ENST00000384401 135 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 RNU6-606P-201ENST00000384721 111 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 MIR218-1-201ENST00000384999 110 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 MIR301A-201ENST00000385261 86 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 MIR454-201ENST00000390180 115 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HNF4AP41235 RPS12P24-201ENST00000412619 387 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.71□□□□□ -1.98
HNF4AP41235 AL139132.1-201ENST00000431587 344 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 FABP5P14-201ENST00000437273 393 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AL356010.1-201ENST00000456364 102 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AL441985.1-201ENST00000457727 251 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.71□□□□□ -1.98
HNF4AP41235 AC080013.2-201ENST00000460866 323 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.71□□□□□ -1.98
HNF4AP41235 RPS29P25-201ENST00000481709 171 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.71□□□□□ -1.98
HNF4AP41235 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.71□□□□□ -1.98
HNF4AP41235 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.71□□□□□ -1.98
HNF4AP41235 RNA5SP401-201ENST00000515920 127 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 RNU6-677P-201ENST00000516914 101 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 RNU6-1183P-201ENST00000517054 60 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 RNU1-104P-201ENST00000517280 175 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AP003122.3-201ENST00000526316 255 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AC084851.1-201ENST00000529105 249 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 OR5B19P-201ENST00000531766 928 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.71□□□□□ -1.98
HNF4AP41235 ELOCP31-201ENST00000540463 467 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.71□□□□□ -1.98
HNF4AP41235 AC069294.1-201ENST00000608397 350 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AL365204.3-201ENST00000612448 685 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.71□□□□□ -1.98
HNF4AP41235 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.71□□□□□ -1.98
HNF4AP41235 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HNF4AP41235 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.71□□□□□ -1.98
HNF4AP41235 AC006020.1-201ENST00000420179 1854 ntBASIC2.71□□□□□ -1.98
HNF4AP41235 AL359854.1-201ENST00000614203 1594 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 Y_RNA.88-201ENST00000363029 99 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 SNORA62.1-201ENST00000364287 154 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HNF4AP41235 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 Z92545.1-201ENST00000411782 234 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AC007064.1-201ENST00000412238 351 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 HMGB1P31-201ENST00000437242 427 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AL353572.1-201ENST00000442490 417 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 AC003982.1-202ENST00000469928 248 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AC117522.1-201ENST00000509821 380 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.7□□□□□ -1.98
HNF4AP41235 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.7□□□□□ -1.98
HNF4AP41235 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.7□□□□□ -1.98
HNF4AP41235 CYCSP39-201ENST00000565821 309 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 MIR4782-201ENST00000577987 79 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 MIR5571-201ENST00000577998 113 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 ZNF861P-201ENST00000588126 639 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AL162413.1-201ENST00000603198 110 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 YWHAEP7-203ENST00000622054 312 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.7□□□□□ -1.98
HNF4AP41235 AC006386.2-201ENST00000624491 75 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 AC012005.1-201ENST00000624575 75 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 FER-210ENST00000628534 558 ntTSL 5 BASIC2.7□□□□□ -1.98
HNF4AP41235 AL512643.1-201ENST00000635735 524 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 MTND5P42-201ENST00000637720 498 ntBASIC2.7□□□□□ -1.98
HNF4AP41235 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HNF4AP41235 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HNF4AP41235 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HNF4AP41235 RNU6-486P-201ENST00000363116 107 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 Y_RNA.303-201ENST00000364998 94 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 RNU6-61P-201ENST00000365528 109 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 RNU6-946P-201ENST00000383878 107 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 RNU6-1068P-201ENST00000410958 103 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 MTCYBP8-201ENST00000422855 651 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 BX276092.3-201ENST00000424182 230 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.69□□□□□ -1.98
HNF4AP41235 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.69□□□□□ -1.98
HNF4AP41235 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.69□□□□□ -1.98
HNF4AP41235 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.69□□□□□ -1.98
HNF4AP41235 RPS29P15-201ENST00000458329 171 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 RNU7-63P-201ENST00000459054 62 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 RNU6-261P-201ENST00000459506 102 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.69□□□□□ -1.98
HNF4AP41235 AC092436.1-201ENST00000506450 503 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 PRDX4P1-201ENST00000507189 574 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms