Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCNFP41002 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNFP41002 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCNFP41002 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNFP41002 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNFP41002 RNU1-76P-201ENST00000362903 159 ntBASIC4.12□□□□□ -1.75
CCNFP41002 RNU6-105P-201ENST00000363909 104 ntBASIC4.12□□□□□ -1.75
CCNFP41002 U3.13-201ENST00000364804 214 ntBASIC4.12□□□□□ -1.75
CCNFP41002 Y_RNA.350-201ENST00000365409 98 ntBASIC4.12□□□□□ -1.75
CCNFP41002 RPS29P13-201ENST00000402041 169 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AL138878.1-201ENST00000405131 347 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AL591034.1-201ENST00000407447 340 ntBASIC4.12□□□□□ -1.75
CCNFP41002 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AL591043.1-201ENST00000432461 424 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNFP41002 SNORD127-201ENST00000458892 86 ntBASIC4.12□□□□□ -1.75
CCNFP41002 TOMM22P6-201ENST00000465035 409 ntBASIC4.12□□□□□ -1.75
CCNFP41002 UQCRHP4-201ENST00000471686 272 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AC074250.1-201ENST00000511117 192 ntBASIC4.12□□□□□ -1.75
CCNFP41002 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.12□□□□□ -1.75
CCNFP41002 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.12□□□□□ -1.75
CCNFP41002 SNORA43.2-201ENST00000516652 128 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNFP41002 AP004607.1-201ENST00000524456 203 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AP003733.2-201ENST00000529409 171 ntBASIC4.12□□□□□ -1.75
CCNFP41002 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNFP41002 AC073410.2-201ENST00000603240 332 ntBASIC4.12□□□□□ -1.75
CCNFP41002 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNFP41002 AC083809.1-201ENST00000615051 472 ntBASIC4.12□□□□□ -1.75
CCNFP41002 MIR3653-201ENST00000625572 110 ntBASIC4.12□□□□□ -1.75
CCNFP41002 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNFP41002 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNFP41002 AP000560.1-201ENST00000624150 1937 ntBASIC4.12□□□□□ -1.75
CCNFP41002 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCNFP41002 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNFP41002 AC002546.1-201ENST00000588041 2504 ntBASIC4.12□□□□□ -1.75
CCNFP41002 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNFP41002 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNFP41002 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNFP41002 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNFP41002 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNFP41002 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNFP41002 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNFP41002 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCNFP41002 MIR423-201ENST00000362201 94 ntBASIC4.11□□□□□ -1.75
CCNFP41002 MTCYBP2-201ENST00000407745 171 ntBASIC4.11□□□□□ -1.75
CCNFP41002 RNA5SP44-201ENST00000410446 133 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNFP41002 RPEP5-201ENST00000441137 268 ntBASIC4.11□□□□□ -1.75
CCNFP41002 FCF1P4-201ENST00000448326 183 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AC006026.2-201ENST00000457376 180 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AC109327.1-201ENST00000471666 403 ntBASIC4.11□□□□□ -1.75
CCNFP41002 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNFP41002 AC091167.1-201ENST00000492017 396 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AC099522.1-202ENST00000514718 367 ntBASIC4.11□□□□□ -1.75
CCNFP41002 Y_RNA.680-201ENST00000516441 93 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AC109329.1-201ENST00000518744 317 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AC034114.1-201ENST00000520293 285 ntBASIC4.11□□□□□ -1.75
CCNFP41002 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNFP41002 SYF2P1-201ENST00000550658 413 ntBASIC4.11□□□□□ -1.75
CCNFP41002 MIR3128-201ENST00000581957 66 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CCNFP41002 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNFP41002 AC096772.1-201ENST00000609146 564 ntBASIC4.11□□□□□ -1.75
CCNFP41002 AC241585.2-209ENST00000638217 143 ntBASIC4.11□□□□□ -1.75
CCNFP41002 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCNFP41002 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNFP41002 AC233981.2-201ENST00000611524 1614 ntBASIC4.1□□□□□ -1.75
CCNFP41002 RLIMP1-201ENST00000339626 1680 ntBASIC4.1□□□□□ -1.75
CCNFP41002 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCNFP41002 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNFP41002 MIR383-201ENST00000362257 73 ntBASIC4.1□□□□□ -1.75
CCNFP41002 RNU6-884P-201ENST00000363889 107 ntBASIC4.1□□□□□ -1.75
CCNFP41002 Z98749.2-208ENST00000381646 500 ntBASIC4.1□□□□□ -1.75
CCNFP41002 Y_RNA.552-201ENST00000384665 112 ntBASIC4.1□□□□□ -1.75
CCNFP41002 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCNFP41002 AC009310.1-201ENST00000414414 451 ntBASIC4.1□□□□□ -1.75
CCNFP41002 ARL5AP4-201ENST00000430731 512 ntBASIC4.1□□□□□ -1.75
CCNFP41002 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.1□□□□□ -1.75
CCNFP41002 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCNFP41002 RPL37P4-201ENST00000448908 268 ntBASIC4.1□□□□□ -1.75
CCNFP41002 LINC01399-202ENST00000458450 244 ntBASIC4.1□□□□□ -1.75
CCNFP41002 RNA5SP246-201ENST00000458909 119 ntBASIC4.1□□□□□ -1.75
CCNFP41002 AF213884.1-201ENST00000488102 463 ntBASIC4.1□□□□□ -1.75
CCNFP41002 HMGB1P35-201ENST00000503360 598 ntBASIC4.1□□□□□ -1.75
CCNFP41002 RNU7-143P-201ENST00000516781 65 ntBASIC4.1□□□□□ -1.75
CCNFP41002 RNA5SP143-201ENST00000516936 115 ntBASIC4.1□□□□□ -1.75
CCNFP41002 RNU6-703P-201ENST00000516946 107 ntBASIC4.1□□□□□ -1.75
CCNFP41002 MRPS36P4-201ENST00000534436 298 ntBASIC4.1□□□□□ -1.75
CCNFP41002 GNRHR2P1-201ENST00000555315 631 ntBASIC4.1□□□□□ -1.75
CCNFP41002 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.1□□□□□ -1.75
CCNFP41002 AL020997.2-201ENST00000602607 184 ntBASIC4.1□□□□□ -1.75
CCNFP41002 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
CCNFP41002 MIR6758-201ENST00000620653 63 ntBASIC4.1□□□□□ -1.75
CCNFP41002 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCNFP41002 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNFP41002 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
CCNFP41002 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNFP41002 MTND5P6-201ENST00000422338 1798 ntBASIC4.09□□□□□ -1.75
CCNFP41002 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms