Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC078899.3-201ENST00000599065 212 ntBASIC3.23□□□□□ -1.89
CHKAP35790 AC146944.4-201ENST00000602697 718 ntBASIC3.23□□□□□ -1.89
CHKAP35790 AC024153.1-201ENST00000603103 365 ntBASIC3.23□□□□□ -1.89
CHKAP35790 SCARNA17.4-201ENST00000614296 143 ntBASIC3.23□□□□□ -1.89
CHKAP35790 RMST_7.1-201ENST00000621935 268 ntBASIC3.23□□□□□ -1.89
CHKAP35790 MIR3529-201ENST00000637713 78 ntBASIC3.23□□□□□ -1.89
CHKAP35790 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHKAP35790 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKAP35790 OR4G1P-203ENST00000641984 1631 ntBASIC3.22□□□□□ -1.89
CHKAP35790 MTND5P30-201ENST00000452896 1731 ntBASIC3.22□□□□□ -1.89
CHKAP35790 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CHKAP35790 RNU6-451P-201ENST00000362921 107 ntBASIC3.22□□□□□ -1.89
CHKAP35790 RNU6-266P-201ENST00000364225 107 ntBASIC3.22□□□□□ -1.89
CHKAP35790 Y_RNA.231-201ENST00000364358 102 ntBASIC3.22□□□□□ -1.89
CHKAP35790 RNU4-20P-201ENST00000365601 151 ntBASIC3.22□□□□□ -1.89
CHKAP35790 UBA52P6-201ENST00000399822 382 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AL031121.1-201ENST00000406553 254 ntBASIC3.22□□□□□ -1.89
CHKAP35790 MIR548F1-201ENST00000408667 84 ntBASIC3.22□□□□□ -1.89
CHKAP35790 RPLP0P7-201ENST00000416050 667 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AL513477.1-202ENST00000417061 214 ntBASIC3.22□□□□□ -1.89
CHKAP35790 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKAP35790 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKAP35790 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.22□□□□□ -1.89
CHKAP35790 RPS26P21-201ENST00000475397 348 ntBASIC3.22□□□□□ -1.89
CHKAP35790 RPL21P99-201ENST00000480369 423 ntBASIC3.22□□□□□ -1.89
CHKAP35790 RPL21P93-201ENST00000480465 489 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKAP35790 HIGD1AP13-201ENST00000509878 289 ntBASIC3.22□□□□□ -1.89
CHKAP35790 RNU5B-3P-201ENST00000516601 115 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKAP35790 MTND1P35-201ENST00000526739 508 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKAP35790 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKAP35790 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKAP35790 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKAP35790 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKAP35790 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKAP35790 AC019159.1-201ENST00000605094 187 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AC011890.2-201ENST00000613393 294 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AC103705.1-201ENST00000619013 241 ntBASIC3.22□□□□□ -1.89
CHKAP35790 AC138627.2-201ENST00000624202 601 ntBASIC3.22□□□□□ -1.89
CHKAP35790 MIR3688-2-201ENST00000636963 87 ntBASIC3.22□□□□□ -1.89
CHKAP35790 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKAP35790 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHKAP35790 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHKAP35790 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKAP35790 AC138393.1-203ENST00000327086 343 ntBASIC3.21□□□□□ -1.9
CHKAP35790 Y_RNA.38-201ENST00000362617 102 ntBASIC3.21□□□□□ -1.9
CHKAP35790 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
CHKAP35790 RNU6-487P-201ENST00000365430 104 ntBASIC3.21□□□□□ -1.9
CHKAP35790 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.21□□□□□ -1.9
CHKAP35790 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.9
CHKAP35790 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
CHKAP35790 POLHP1-201ENST00000411806 470 ntBASIC3.21□□□□□ -1.9
CHKAP35790 OR9R1P-201ENST00000412200 877 ntBASIC3.21□□□□□ -1.9
CHKAP35790 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.21□□□□□ -1.9
CHKAP35790 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.21□□□□□ -1.9
CHKAP35790 RPS3AP44-201ENST00000425466 790 ntBASIC3.21□□□□□ -1.9
CHKAP35790 AC009296.1-201ENST00000443146 155 ntBASIC3.21□□□□□ -1.9
CHKAP35790 Z96811.1-201ENST00000445880 108 ntBASIC3.21□□□□□ -1.9
CHKAP35790 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.21□□□□□ -1.9
CHKAP35790 MED28P2-201ENST00000475771 317 ntBASIC3.21□□□□□ -1.9
CHKAP35790 AC008885.1-201ENST00000514930 301 ntBASIC3.21□□□□□ -1.9
CHKAP35790 RN7SKP272-201ENST00000516988 232 ntBASIC3.21□□□□□ -1.9
CHKAP35790 AC023050.3-201ENST00000541142 333 ntBASIC3.21□□□□□ -1.9
CHKAP35790 AC008121.1-201ENST00000603244 268 ntBASIC3.21□□□□□ -1.9
CHKAP35790 AL137843.1-201ENST00000605078 385 ntBASIC3.21□□□□□ -1.9
CHKAP35790 AC002044.1-201ENST00000606707 158 ntBASIC3.21□□□□□ -1.9
CHKAP35790 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHKAP35790 U6atac.1-201ENST00000616025 117 ntBASIC3.21□□□□□ -1.9
CHKAP35790 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHKAP35790 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKAP35790 AC026241.1-201ENST00000517873 2142 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
CHKAP35790 MTND5P19-201ENST00000424872 1794 ntBASIC3.2□□□□□ -1.9
CHKAP35790 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHKAP35790 Y_RNA.89-201ENST00000363031 102 ntBASIC3.2□□□□□ -1.9
CHKAP35790 RNU5E-7P-201ENST00000365290 117 ntBASIC3.2□□□□□ -1.9
CHKAP35790 Y_RNA.453-201ENST00000384223 109 ntBASIC3.2□□□□□ -1.9
CHKAP35790 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHKAP35790 RNA5SP219-201ENST00000390940 113 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AL096701.2-201ENST00000416920 238 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.2□□□□□ -1.9
CHKAP35790 MICF-203ENST00000432679 129 ntBASIC3.2□□□□□ -1.9
CHKAP35790 ERLEC1P1-201ENST00000433806 578 ntBASIC3.2□□□□□ -1.9
CHKAP35790 RNU6-1208P-201ENST00000459588 107 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AL121769.1-201ENST00000469473 401 ntBASIC3.2□□□□□ -1.9
CHKAP35790 SNORA43.2-201ENST00000516652 128 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AC109479.2-201ENST00000517842 174 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
CHKAP35790 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKAP35790 VN1R80P-201ENST00000597126 338 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AC093732.2-201ENST00000607950 274 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.2□□□□□ -1.9
CHKAP35790 AC092794.1-201ENST00000612734 582 ntBASIC3.2□□□□□ -1.9
CHKAP35790 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
CHKAP35790 MIR7515-201ENST00000637837 67 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AL355596.1-201ENST00000565399 3996 ntBASIC3.2□□□□□ -1.9
CHKAP35790 AL109809.4-201ENST00000603520 2185 ntBASIC3.19□□□□□ -1.9
CHKAP35790 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms