Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CIITAP33076 Y_RNA.11-201ENST00000362375 109 ntBASIC3.28□□□□□ -1.88
CIITAP33076 RNU6-799P-201ENST00000363567 107 ntBASIC3.28□□□□□ -1.88
CIITAP33076 RNU6-512P-201ENST00000364438 103 ntBASIC3.28□□□□□ -1.88
CIITAP33076 RNU6-1027P-201ENST00000383998 107 ntBASIC3.28□□□□□ -1.88
CIITAP33076 RNU6-393P-201ENST00000384475 107 ntBASIC3.28□□□□□ -1.88
CIITAP33076 RPL5P18-201ENST00000406671 891 ntBASIC3.28□□□□□ -1.88
CIITAP33076 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.28□□□□□ -1.88
CIITAP33076 RNA5SP111-201ENST00000411386 101 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.28□□□□□ -1.88
CIITAP33076 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
CIITAP33076 AL592045.1-201ENST00000429867 352 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.28□□□□□ -1.88
CIITAP33076 AL365400.1-201ENST00000431854 640 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AL591704.1-201ENST00000432574 275 ntBASIC3.28□□□□□ -1.88
CIITAP33076 HMGB1P18-201ENST00000438801 619 ntBASIC3.28□□□□□ -1.88
CIITAP33076 Z82210.1-201ENST00000440037 231 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.28□□□□□ -1.88
CIITAP33076 AL360271.2-201ENST00000447710 161 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.28□□□□□ -1.88
CIITAP33076 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.28□□□□□ -1.88
CIITAP33076 RPL21P41-201ENST00000459863 264 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AC087884.1-201ENST00000469738 328 ntBASIC3.28□□□□□ -1.88
CIITAP33076 RPS26P21-201ENST00000475397 348 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AC097462.2-201ENST00000504623 481 ntBASIC3.28□□□□□ -1.88
CIITAP33076 SCGB1D5P-201ENST00000515134 247 ntBASIC3.28□□□□□ -1.88
CIITAP33076 TRAV28-201ENST00000557548 323 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AMZ2P1-203ENST00000565833 850 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.28□□□□□ -1.88
CIITAP33076 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.28□□□□□ -1.88
CIITAP33076 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CIITAP33076 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.28□□□□□ -1.88
CIITAP33076 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CIITAP33076 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CIITAP33076 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.28□□□□□ -1.89
CIITAP33076 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.28□□□□□ -1.89
CIITAP33076 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.27□□□□□ -1.89
CIITAP33076 AC010680.1-201ENST00000590024 3590 ntBASIC3.27□□□□□ -1.89
CIITAP33076 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CIITAP33076 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CIITAP33076 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CIITAP33076 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CIITAP33076 RNU4-79P-201ENST00000362764 141 ntBASIC3.27□□□□□ -1.89
CIITAP33076 RNU6-1167P-201ENST00000363227 94 ntBASIC3.27□□□□□ -1.89
CIITAP33076 RNU6-254P-201ENST00000363377 107 ntBASIC3.27□□□□□ -1.89
CIITAP33076 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CIITAP33076 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 RNU6-1035P-201ENST00000384477 107 ntBASIC3.27□□□□□ -1.89
CIITAP33076 MIR578-201ENST00000384828 96 ntBASIC3.27□□□□□ -1.89
CIITAP33076 RN7SKP58-201ENST00000411010 305 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC080125.1-201ENST00000414888 684 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC022018.1-201ENST00000430685 241 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 AC009969.1-201ENST00000438726 172 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.27□□□□□ -1.89
CIITAP33076 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
CIITAP33076 SNORA59A-201ENST00000459326 152 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC104472.2-201ENST00000469035 601 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 HIGD1AP13-201ENST00000509878 289 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.27□□□□□ -1.89
CIITAP33076 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.27□□□□□ -1.89
CIITAP33076 RNU6-189P-201ENST00000516120 101 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.27□□□□□ -1.89
CIITAP33076 AP000867.2-201ENST00000532468 320 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 AC002545.1-201ENST00000592511 181 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC073539.2-201ENST00000597113 165 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AL121757.2-201ENST00000611223 313 ntBASIC3.27□□□□□ -1.89
CIITAP33076 uc_338.5-201ENST00000611839 155 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC004852.3-201ENST00000614131 326 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC093913.1-201ENST00000614178 329 ntBASIC3.27□□□□□ -1.89
CIITAP33076 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.27□□□□□ -1.89
CIITAP33076 SCARNA15.3-201ENST00000626315 122 ntBASIC3.27□□□□□ -1.89
CIITAP33076 SCARNA4.1-201ENST00000628597 123 ntBASIC3.27□□□□□ -1.89
CIITAP33076 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.27□□□□□ -1.89
CIITAP33076 MTND1P37-201ENST00000636562 264 ntBASIC3.27□□□□□ -1.89
CIITAP33076 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
CIITAP33076 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CIITAP33076 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.26□□□□□ -1.89
CIITAP33076 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CIITAP33076 RNU4-76P-201ENST00000364509 141 ntBASIC3.26□□□□□ -1.89
CIITAP33076 SNORA75B-201ENST00000384053 137 ntBASIC3.26□□□□□ -1.89
CIITAP33076 RNA5SP219-201ENST00000390940 113 ntBASIC3.26□□□□□ -1.89
CIITAP33076 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CIITAP33076 HMGB1P27-201ENST00000431429 603 ntBASIC3.26□□□□□ -1.89
CIITAP33076 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.26□□□□□ -1.89
CIITAP33076 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.26□□□□□ -1.89
CIITAP33076 RN7SL283P-201ENST00000489055 303 ntBASIC3.26□□□□□ -1.89
CIITAP33076 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.26□□□□□ -1.89
CIITAP33076 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.26□□□□□ -1.89
CIITAP33076 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.26□□□□□ -1.89
CIITAP33076 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.26□□□□□ -1.89
CIITAP33076 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
CIITAP33076 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.26□□□□□ -1.89
CIITAP33076 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms