Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AP004607.1-201ENST00000524456 203 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.89□□□□□ -1.79
CNGA1P29973 AC006199.1-201ENST00000548728 219 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 FGF7P1-201ENST00000582820 288 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.89□□□□□ -1.79
CNGA1P29973 AL670379.10-201ENST00000604330 253 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AL670379.9-201ENST00000605428 253 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AC010378.1-201ENST00000619270 362 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNGA1P29973 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
CNGA1P29973 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CNGA1P29973 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.89□□□□□ -1.79
CNGA1P29973 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNGA1P29973 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNGA1P29973 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CNGA1P29973 ZNF519P1-201ENST00000449011 1626 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 ADAM3A-203ENST00000461344 2157 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNGA1P29973 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNGA1P29973 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.88□□□□□ -1.79
CNGA1P29973 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNGA1P29973 RNU6-214P-201ENST00000384130 107 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 Y_RNA.510-201ENST00000384511 114 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 SNORD73A-201ENST00000386062 65 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.88□□□□□ -1.79
CNGA1P29973 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.88□□□□□ -1.79
CNGA1P29973 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.88□□□□□ -1.79
CNGA1P29973 RPS15AP6-201ENST00000420703 385 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 RPL31P12-201ENST00000422587 358 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.88□□□□□ -1.79
CNGA1P29973 RPL23AP45-201ENST00000476406 468 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 FGF7P4-201ENST00000509595 295 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 COPS8P3-201ENST00000526024 482 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.88□□□□□ -1.79
CNGA1P29973 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.88□□□□□ -1.79
CNGA1P29973 MIR4425-201ENST00000580572 84 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 AL117336.2-201ENST00000602435 335 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.88□□□□□ -1.79
CNGA1P29973 uc_338.15-201ENST00000615470 191 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 AC104985.2-201ENST00000620598 500 ntBASIC3.88□□□□□ -1.79
CNGA1P29973 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.88□□□□□ -1.79
CNGA1P29973 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CNGA1P29973 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CNGA1P29973 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CNGA1P29973 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNGA1P29973 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNGA1P29973 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.87□□□□□ -1.79
CNGA1P29973 RNU6-942P-201ENST00000363002 107 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 RNU1-100P-201ENST00000365255 165 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 RNU6-1329P-201ENST00000365664 107 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CNGA1P29973 AL360182.1-201ENST00000397433 468 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.87□□□□□ -1.79
CNGA1P29973 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.87□□□□□ -1.79
CNGA1P29973 UBE2V1P4-201ENST00000425374 344 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.87□□□□□ -1.79
CNGA1P29973 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.87□□□□□ -1.79
CNGA1P29973 S100A11P2-201ENST00000467589 312 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 RN7SL594P-201ENST00000470590 287 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.87□□□□□ -1.79
CNGA1P29973 AC110794.1-201ENST00000505816 425 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 RNA5SP454-201ENST00000517231 127 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 AP006245.1-201ENST00000522549 120 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 AP005639.2-201ENST00000527592 928 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 RAB11AP2-201ENST00000545905 639 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 MIR5004-201ENST00000579078 107 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 AC138761.3-201ENST00000579993 334 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
CNGA1P29973 AC006557.5-201ENST00000603126 811 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 ELOCP5-201ENST00000604924 333 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 MIR3199-2-201ENST00000636243 86 ntBASIC3.87□□□□□ -1.79
CNGA1P29973 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CNGA1P29973 RNU6-562P-201ENST00000362731 107 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AL357075.1-201ENST00000404107 726 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AC017079.2-201ENST00000416102 485 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AC093151.1-201ENST00000427711 313 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 SNAP23P1-201ENST00000433229 246 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.86□□□□□ -1.79
CNGA1P29973 AC125238.1-201ENST00000448842 249 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 MTND1P17-201ENST00000448961 204 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.86□□□□□ -1.79
CNGA1P29973 AC092436.3-201ENST00000511788 257 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 Y_RNA.682-201ENST00000516457 100 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.86□□□□□ -1.79
CNGA1P29973 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.86□□□□□ -1.79
CNGA1P29973 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CNGA1P29973 AC026371.1-201ENST00000551867 419 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.86□□□□□ -1.79
CNGA1P29973 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AC243960.4-201ENST00000600532 288 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AL132765.2-201ENST00000610812 351 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AC104237.2-201ENST00000612456 443 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 AC009233.1-201ENST00000616477 371 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.86□□□□□ -1.79
CNGA1P29973 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CNGA1P29973 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.86□□□□□ -1.79
CNGA1P29973 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CNGA1P29973 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CNGA1P29973 ZNF826P-207ENST00000622273 1910 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms