Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-348P-201ENST00000384386 107 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 U3.20-201ENST00000390909 217 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AL136372.1-201ENST00000403060 228 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 MRPL42P2-201ENST00000403169 426 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 RNU6-712P-201ENST00000410558 100 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.64□□□□□ -2.15
COL5A1P20908 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.64□□□□□ -2.15
COL5A1P20908 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.64□□□□□ -2.15
COL5A1P20908 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.64□□□□□ -2.15
COL5A1P20908 MTND1P2-201ENST00000430604 821 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AL645568.3-201ENST00000433683 316 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 CKS1BP5-201ENST00000434172 273 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.64□□□□□ -2.15
COL5A1P20908 UBE2V1P13-201ENST00000436983 439 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AL031667.1-201ENST00000440222 725 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AP000542.1-201ENST00000448473 371 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 KLF3P2-201ENST00000465138 268 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.64□□□□□ -2.15
COL5A1P20908 RNU6-528P-201ENST00000516926 100 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AC090572.1-201ENST00000519251 160 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 MTCYBP41-201ENST00000528913 1123 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AP003181.2-201ENST00000528941 181 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.64□□□□□ -2.15
COL5A1P20908 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.64□□□□□ -2.15
COL5A1P20908 AC090615.1-201ENST00000577519 154 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 MTND1P15-201ENST00000579262 949 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AC060771.1-201ENST00000582031 164 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 UBE2L4-201ENST00000587688 464 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 DEFB131E-202ENST00000602581 683 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 RBM11P1-201ENST00000604951 799 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AL158211.4-201ENST00000606988 584 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AL138880.2-201ENST00000616214 239 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 MIR6515-201ENST00000619843 57 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AL158801.5-201ENST00000623123 465 ntBASIC1.64□□□□□ -2.15
COL5A1P20908 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL5A1P20908 RNU6-853P-201ENST00000364306 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 SNORA14A-201ENST00000364773 135 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-1180P-201ENST00000364935 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNY3P13-201ENST00000365542 102 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 Z98749.2-208ENST00000381646 500 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-1-201ENST00000383898 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-42P-201ENST00000384165 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-36P-201ENST00000384172 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-4P-201ENST00000384205 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-5P-201ENST00000384238 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-3P-201ENST00000384314 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-809P-201ENST00000384461 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 Y_RNA.516-201ENST00000384541 124 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-2-201ENST00000384627 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-9-201ENST00000384776 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-33P-201ENST00000384793 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU2-39P-201ENST00000410604 198 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL5A1P20908 MTND1P23-201ENST00000416931 372 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC233728.2-201ENST00000425348 757 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 SNRPEP4-201ENST00000435815 279 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL049734.2-201ENST00000441066 616 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC244505.5-201ENST00000443639 207 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC007395.1-201ENST00000451333 677 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 RNA5SP220-201ENST00000516298 104 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC022690.1-201ENST00000526681 550 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AP003072.2-201ENST00000527756 676 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC125611.2-201ENST00000551907 647 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.63□□□□□ -2.15
COL5A1P20908 MIR3146-201ENST00000580367 79 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 MIR3118-1-201ENST00000581787 76 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.63□□□□□ -2.15
COL5A1P20908 AL359999.1-201ENST00000604513 294 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC004853.1-201ENST00000604902 698 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-6P-201ENST00000606623 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL589743.7-201ENST00000612637 233 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 U4.5-201ENST00000617137 123 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC136475.10-201ENST00000620253 385 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC073534.2-201ENST00000620377 381 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL138713.1-201ENST00000624026 2130 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC091925.2-201ENST00000625059 256 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC093536.2-201ENST00000565257 1406 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC009902.3-201ENST00000606235 2172 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL5A1P20908 Y_RNA.6-201ENST00000362350 114 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-50P-201ENST00000362356 103 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNY4P34-201ENST00000364779 95 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 SNORD114-22-201ENST00000365423 72 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 Y_RNA.354-201ENST00000365448 111 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-769P-201ENST00000384407 104 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-1077P-201ENST00000410506 102 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RNU6-248P-201ENST00000410720 107 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 RPL21P24-201ENST00000413752 448 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms