Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMNB1P20700 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.57□□□□□ -1.68
LMNB1P20700 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMNB1P20700 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.57□□□□□ -1.68
LMNB1P20700 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.57□□□□□ -1.68
LMNB1P20700 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMNB1P20700 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LMNB1P20700 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMNB1P20700 RPL9P7-201ENST00000330965 580 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 MIR93-201ENST00000385024 80 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 UBA52P6-201ENST00000399822 382 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMNB1P20700 AL117339.3-201ENST00000418733 162 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.57□□□□□ -1.68
LMNB1P20700 AL513043.1-201ENST00000439124 535 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 HMGB1P37-201ENST00000439613 609 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.57□□□□□ -1.68
LMNB1P20700 PCNPP5-201ENST00000452246 481 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 snoU13.4-201ENST00000458916 104 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 RPL9P9-202ENST00000466501 579 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 KC877373.1-201ENST00000479066 408 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.57□□□□□ -1.68
LMNB1P20700 Y_RNA.687-201ENST00000516558 91 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.57□□□□□ -1.68
LMNB1P20700 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.57□□□□□ -1.68
LMNB1P20700 MIR1244-1-201ENST00000612829 85 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 MIR1244-3-201ENST00000635744 85 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 MIR1244-2-201ENST00000636449 85 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 MIR1244-4-202ENST00000636813 85 ntBASIC4.57□□□□□ -1.68
LMNB1P20700 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.57□□□□□ -1.68
LMNB1P20700 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMNB1P20700 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMNB1P20700 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.57□□□□□ -1.68
LMNB1P20700 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMNB1P20700 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMNB1P20700 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMNB1P20700 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LMNB1P20700 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
LMNB1P20700 AC058791.1-201ENST00000608412 3198 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 Y_RNA.380-201ENST00000365663 111 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 U3.19-201ENST00000390893 196 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 RPL21P1-201ENST00000399532 476 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 MIR1252-201ENST00000408861 65 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 PIGFP3-201ENST00000441918 722 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.56□□□□□ -1.68
LMNB1P20700 NDUFB1P2-201ENST00000449477 176 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 OR2AQ1P-201ENST00000451972 200 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 RNU6-1037P-201ENST00000459571 107 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 AC006517.1-201ENST00000480485 328 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 NDUFB4P9-201ENST00000511646 388 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.56□□□□□ -1.68
LMNB1P20700 SNORA31.8-201ENST00000516327 108 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 Y_RNA.715-201ENST00000517082 110 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.56□□□□□ -1.68
LMNB1P20700 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
LMNB1P20700 AC103996.1-201ENST00000555468 102 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.56□□□□□ -1.68
LMNB1P20700 Z98751.3-201ENST00000604447 521 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 HMGB1P24-202ENST00000615653 685 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 U2.1-201ENST00000618978 145 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 AC007792.1-201ENST00000623023 402 ntBASIC4.56□□□□□ -1.68
LMNB1P20700 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LMNB1P20700 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMNB1P20700 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMNB1P20700 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 MFSD8-236ENST00000641509 4050 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 Y_RNA.307-201ENST00000365022 117 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 SNORD14.1-201ENST00000365609 90 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 RNU6-166P-201ENST00000384371 107 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 RNU6-933P-201ENST00000384424 107 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 MIR10A-201ENST00000385043 110 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 SNORA40C-201ENST00000391285 128 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 AC017083.1-201ENST00000428093 483 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 AC087650.1-201ENST00000431445 468 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.55□□□□□ -1.68
LMNB1P20700 DYNLT3P2-201ENST00000442517 295 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.55□□□□□ -1.68
LMNB1P20700 HMGN2P7-201ENST00000456186 273 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 RNU7-169P-201ENST00000459456 61 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.55□□□□□ -1.68
LMNB1P20700 AC040926.1-201ENST00000530195 238 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.55□□□□□ -1.68
LMNB1P20700 EIF4BP1-201ENST00000554881 351 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 MIR7851-201ENST00000610611 160 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 AL161629.2-201ENST00000615347 275 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 AL353746.1-201ENST00000566293 6881 ntBASIC4.55□□□□□ -1.68
LMNB1P20700 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMNB1P20700 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
LMNB1P20700 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMNB1P20700 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMNB1P20700 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.54□□□□□ -1.68
LMNB1P20700 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMNB1P20700 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMNB1P20700 Y_RNA.26-201ENST00000362539 101 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms