Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 SNORA31-201ENST00000362607 130 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 Y_RNA.541-201ENST00000384640 113 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 SNORD96B-201ENST00000386148 79 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 MIR1271-201ENST00000408537 86 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 SNORA3.3-201ENST00000408712 125 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 Y_RNA.623-201ENST00000411128 95 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 RPS29P26-201ENST00000477483 171 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC087190.1-201ENST00000484462 480 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC107032.1-201ENST00000485945 480 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC139453.3-201ENST00000493276 369 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 RPS23P5-201ENST00000495419 428 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 SERF1AP1-201ENST00000514575 187 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC007458.1-201ENST00000542812 373 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC005086.4-201ENST00000623065 213 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 Y_RNA.27-201ENST00000362540 103 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-595P-201ENST00000363944 107 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 SNORD14B-201ENST00000364533 90 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-933P-201ENST00000384424 107 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 MIR491-201ENST00000384877 84 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 MIR34B-201ENST00000385076 84 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 MIR493-201ENST00000385254 89 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 RNA5SP494-201ENST00000410653 129 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 AL096701.2-201ENST00000416920 238 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 Z82210.1-201ENST00000440037 231 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 AL513124.1-201ENST00000450410 614 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-1278P-201ENST00000516130 107 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 IGKV2D-19-201ENST00000523346 262 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 AP004242.1-201ENST00000533701 349 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 MZT1P2-201ENST00000604387 248 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 AP001148.1-201ENST00000624124 2359 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 AL359693.1-201ENST00000614959 2407 ntBASIC5.31□□□□□ -1.56
CSB-PGBD3P0DP91 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-37P-201ENST00000362692 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 Y_RNA.76-201ENST00000362931 109 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-704P-201ENST00000364162 103 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-11P-201ENST00000364234 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-1317P-201ENST00000364582 104 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-7-201ENST00000364784 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-8-201ENST00000365467 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-25P-201ENST00000383873 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-1-201ENST00000383898 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-36P-201ENST00000384172 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-4P-201ENST00000384205 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-5P-201ENST00000384238 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-3P-201ENST00000384314 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-16P-201ENST00000384385 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-15P-201ENST00000384534 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-2-201ENST00000384627 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-29P-201ENST00000384637 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-9-201ENST00000384776 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-700P-201ENST00000391043 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU2-68P-201ENST00000410878 191 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RPS29P4-201ENST00000414733 161 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 TOMM20P4-201ENST00000427861 435 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 MTND3P9-201ENST00000429526 346 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 AL627311.1-201ENST00000431514 115 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 SNORA70.24-201ENST00000517233 118 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 MIR5696-201ENST00000578474 85 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-6P-201ENST00000606623 107 ntBASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 AC090740.1-201ENST00000623193 2262 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms