Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC098614.4-201ENST00000607601 462 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 RNU6-817P-201ENST00000391083 104 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC083875.1-201ENST00000419509 405 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 UBE2V1P4-201ENST00000425374 344 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AL121601.2-201ENST00000438019 707 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 MTND1P16-201ENST00000465177 898 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 RPS3AP22-201ENST00000488297 769 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 RPL36AP21-201ENST00000490372 323 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC079395.1-201ENST00000510981 262 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 MTCYBP43-201ENST00000513621 740 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC112198.4-201ENST00000515450 351 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC023043.2-201ENST00000589678 1026 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 BNIP3P9-201ENST00000603714 553 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC007363.1-201ENST00000604736 620 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC096772.1-201ENST00000609146 564 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC131235.4-201ENST00000609288 620 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC092574.1-201ENST00000609771 420 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC084824.5-201ENST00000612009 413 ntBASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DQB2P05538 AP000560.1-201ENST00000624150 1937 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 RNU6-1010P-201ENST00000362757 107 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 RNU6-701P-201ENST00000384059 107 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AL033519.2-201ENST00000403958 392 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AC004965.1-201ENST00000413033 213 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AL022400.1-201ENST00000423946 935 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AP000949.1-201ENST00000438328 629 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 NEFMP1-201ENST00000443423 1006 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AL357134.1-201ENST00000445848 426 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 DEFB108A-201ENST00000530110 222 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 LRRC6P1-201ENST00000532188 885 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AP000763.2-201ENST00000540641 163 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AC073410.2-201ENST00000603240 332 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 AL132822.1-201ENST00000617063 513 ntBASIC1.23□□□□□ -2.21
HLA-DQB2P05538 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DQB2P05538 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 SNORD114-19-201ENST00000363072 75 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RNU5A-8P-201ENST00000364102 114 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RNU6-338P-201ENST00000383888 105 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RNU6-611P-201ENST00000384276 104 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 Y_RNA.534-201ENST00000384599 112 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 MIR320C1-201ENST00000408566 88 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 USP9YP33-201ENST00000412220 421 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RPS12P24-201ENST00000412619 387 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 MTCO3P46-201ENST00000425787 232 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RPS25P9-201ENST00000435591 252 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 USP9YP35-201ENST00000435696 412 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 MTND4P25-201ENST00000441039 533 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AL078601.1-201ENST00000444542 271 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 PRELID3BP1-201ENST00000457142 540 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RNU6-237P-201ENST00000515985 71 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RNU6-143P-201ENST00000516942 93 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AP005660.1-201ENST00000522972 293 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 SUB1P3-201ENST00000564581 315 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 MIR3198-2-201ENST00000577868 80 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AC073413.2-201ENST00000604332 360 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AC016925.2-201ENST00000605108 242 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.22□□□□□ -2.21
HLA-DQB2P05538 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
HLA-DQB2P05538 RNU6-288P-201ENST00000363690 104 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 RNU6-1164P-201ENST00000364428 107 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 RNU6-166P-201ENST00000384371 107 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 RNU6-1274P-201ENST00000384557 107 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 MIR597-201ENST00000384968 97 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 MIR186-201ENST00000384988 86 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC119751.3-201ENST00000399720 670 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 RNA5SP501-201ENST00000410990 112 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms