Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL139418.1-201ENST00000613613 177 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A1P02462 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A1P02462 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A1P02462 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A1P02462 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A1P02462 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.21□□□□□ -2.22
COL4A1P02462 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 Y_RNA.68-201ENST00000362881 102 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 RNU6-288P-201ENST00000363690 104 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 RNU4-28P-201ENST00000364739 141 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 PIGPP2-201ENST00000411569 458 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC078974.1-201ENST00000411597 223 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AL451054.2-201ENST00000420896 202 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 MTND1P20-201ENST00000430341 950 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 MTATP6P30-201ENST00000443540 664 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A1P02462 AL049874.1-201ENST00000489560 388 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A1P02462 HMGB1P14-201ENST00000557424 591 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC007151.1-201ENST00000572774 483 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 AL031274.2-201ENST00000599419 203 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC021171.1-201ENST00000603137 706 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC025594.3-201ENST00000613068 790 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC022960.3-201ENST00000619794 441 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC091965.5-201ENST00000624785 342 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A1P02462 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A1P02462 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A1P02462 SDAD1P2-201ENST00000441308 2028 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 RNU1-39P-201ENST00000383897 165 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 MIR19A-201ENST00000384878 82 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 MIR767-201ENST00000390228 109 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AL139397.2-201ENST00000404529 772 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 MIR1284-201ENST00000408337 120 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 RNU6-757P-201ENST00000410334 100 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 RNU6-920P-201ENST00000410926 92 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 BPY2DP-201ENST00000422208 265 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC084290.1-201ENST00000434995 374 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A1P02462 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 AC021382.1-201ENST00000483523 359 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A1P02462 SNORA31.16-201ENST00000516773 139 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 RN7SKP258-201ENST00000517151 304 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 DEFB108A-201ENST00000530110 222 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A1P02462 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A1P02462 CR383656.8-201ENST00000549046 145 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 NACAP3-201ENST00000552100 481 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 MIR5571-201ENST00000577998 113 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC090186.1-201ENST00000605991 572 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC072039.2-201ENST00000608883 439 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A1P02462 AL627230.6-201ENST00000611129 280 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC091932.3-201ENST00000624223 323 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC079416.3-201ENST00000624479 549 ntBASIC1.2□□□□□ -2.22
COL4A1P02462 AC007785.2-201ENST00000598627 1916 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.19□□□□□ -2.22
COL4A1P02462 AC009541.1-201ENST00000438279 2662 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 CR848007.1-201ENST00000442354 1699 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 SNORA3A-201ENST00000364113 130 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 Y_RNA.245-201ENST00000364493 95 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 SNORA68.1-201ENST00000364537 132 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.19□□□□□ -2.22
COL4A1P02462 RNU6-701P-201ENST00000384059 107 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 MIR888-201ENST00000401186 77 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AL109755.1-201ENST00000401791 649 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 OR6C66P-201ENST00000414917 930 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A1P02462 ELOCP9-201ENST00000418624 239 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AIMP1P2-201ENST00000425294 312 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 ELOCP14-201ENST00000428070 331 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 TIMM9P1-201ENST00000436122 256 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 ELOCP7-201ENST00000439968 331 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 MTCO3P45-201ENST00000443036 613 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 MTCYBP3-201ENST00000445588 1137 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 DDX3P2-201ENST00000446138 111 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.19□□□□□ -2.22
COL4A1P02462 PMCHL2-203ENST00000457791 237 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 RNU7-23P-201ENST00000459465 62 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 MTND4LP3-201ENST00000468320 276 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 RPL31P41-201ENST00000477967 372 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.19□□□□□ -2.22
COL4A1P02462 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A1P02462 MTCYBP43-201ENST00000513621 740 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 RNA5SP216-201ENST00000516111 123 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 RNU6-390P-201ENST00000516259 103 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 RNA5SP290-201ENST00000517133 127 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC023538.1-201ENST00000534576 736 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A1P02462 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms