Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC112771.1-201ENST00000463581 102 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.76□□□□□ -2.13
SEMA3DO95025 TRBV12-1-201ENST00000479785 344 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 MTND4P2-201ENST00000507767 1203 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 RNA5SP337-201ENST00000517007 109 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.76□□□□□ -2.13
SEMA3DO95025 OR5AL2P-201ENST00000532185 920 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.76□□□□□ -2.13
SEMA3DO95025 HSBP1P1-201ENST00000555205 166 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 PCMTD1P2-201ENST00000565017 355 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 MIR5697-201ENST00000578045 78 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AC009233.1-201ENST00000616477 371 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.76□□□□□ -2.13
SEMA3DO95025 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
SEMA3DO95025 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SEMA3DO95025 TEX21P-201ENST00000447107 1476 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SEMA3DO95025 RNU6-500P-201ENST00000362349 107 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 RNU1-72P-201ENST00000362976 153 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 RNU6-190P-201ENST00000384154 102 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 SNORD115.1-201ENST00000391109 76 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.75□□□□□ -2.13
SEMA3DO95025 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.75□□□□□ -2.13
SEMA3DO95025 AC007283.2-201ENST00000424739 197 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.75□□□□□ -2.13
SEMA3DO95025 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.75□□□□□ -2.13
SEMA3DO95025 RPL7P12-201ENST00000446719 750 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.75□□□□□ -2.13
SEMA3DO95025 EPS15P1-201ENST00000448836 336 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 MTND1P12-201ENST00000455231 147 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 PPP1R2P5-201ENST00000457256 603 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 RPL22P13-201ENST00000493291 347 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 AC092436.1-201ENST00000506450 503 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SEMA3DO95025 AF213884.2-201ENST00000510417 903 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 RNU1-41P-201ENST00000516161 162 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 RNU1-48P-201ENST00000516400 162 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 AP003122.4-201ENST00000530980 758 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 OR5B19P-201ENST00000531766 928 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SEMA3DO95025 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SEMA3DO95025 AL157871.3-201ENST00000557231 293 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.75□□□□□ -2.13
SEMA3DO95025 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.75□□□□□ -2.13
SEMA3DO95025 MIR1273C-201ENST00000578669 77 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.75□□□□□ -2.13
SEMA3DO95025 AC243960.4-201ENST00000600532 288 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 AL138963.2-201ENST00000605137 226 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.75□□□□□ -2.13
SEMA3DO95025 AC027807.2-201ENST00000616099 408 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.75□□□□□ -2.13
SEMA3DO95025 AC138627.2-201ENST00000624202 601 ntBASIC1.75□□□□□ -2.13
SEMA3DO95025 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
SEMA3DO95025 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SEMA3DO95025 Y_RNA.33-201ENST00000362591 102 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 SNORD114-1-201ENST00000362705 72 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 SNORD56.2-201ENST00000363242 71 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 RNU4-1-201ENST00000363925 141 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 SNORA72.3-201ENST00000365074 132 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 RNU6-234P-201ENST00000365229 104 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AC016831.2-201ENST00000417179 352 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 RPL23AP30-201ENST00000432419 501 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.74□□□□□ -2.13
SEMA3DO95025 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.74□□□□□ -2.13
SEMA3DO95025 ZNF114P1-201ENST00000453500 292 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AL441985.1-201ENST00000457727 251 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.74□□□□□ -2.13
SEMA3DO95025 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AC140059.1-201ENST00000489238 361 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AC010587.1-201ENST00000505809 469 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.74□□□□□ -2.13
SEMA3DO95025 MRPS33P3-201ENST00000513456 322 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AC011979.2-201ENST00000527568 352 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AC135279.1-201ENST00000543493 504 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.74□□□□□ -2.13
SEMA3DO95025 AC234772.3-201ENST00000602277 528 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 AC006927.3-201ENST00000638789 384 ntBASIC1.74□□□□□ -2.13
SEMA3DO95025 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SEMA3DO95025 RNU6-39P-201ENST00000384344 107 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 FTH1P15-201ENST00000406984 280 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 RNU6-1140P-201ENST00000410517 106 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 Y_RNA.608-201ENST00000410647 95 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 AC114491.1-201ENST00000416095 246 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.73□□□□□ -2.13
SEMA3DO95025 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 OOSP1P1-201ENST00000423265 274 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 MTND5P2-201ENST00000442927 1142 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.73□□□□□ -2.13
SEMA3DO95025 AL583843.1-201ENST00000456070 346 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 UBL5P3-201ENST00000475112 231 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.73□□□□□ -2.13
SEMA3DO95025 AC117522.2-201ENST00000510049 657 ntBASIC1.73□□□□□ -2.13
SEMA3DO95025 RN7SKP265-201ENST00000516448 223 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 515.7 ms