Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 AC021739.1-201ENST00000559631 174 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.32□□□□□ -1.72
CPNE3O75131 MIR5695-201ENST00000579717 85 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 AL591034.3-201ENST00000605511 685 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.32□□□□□ -1.72
CPNE3O75131 MIR3529-201ENST00000637713 78 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CPNE3O75131 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
CPNE3O75131 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CPNE3O75131 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CPNE3O75131 AC110491.1-201ENST00000562191 2010 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
CPNE3O75131 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CPNE3O75131 RNU1-20P-201ENST00000363314 162 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 Y_RNA.297-201ENST00000364950 91 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 MIR659-201ENST00000384963 97 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 MIR10B-201ENST00000385011 110 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 AL033519.2-201ENST00000403958 392 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 RN7SKP61-201ENST00000410642 295 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 BPY2DP-201ENST00000422208 265 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.31□□□□□ -1.72
CPNE3O75131 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.31□□□□□ -1.72
CPNE3O75131 AC005002.2-201ENST00000438228 269 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CPNE3O75131 HSPE1P25-201ENST00000455484 251 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 RN7SL810P-201ENST00000493031 276 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.31□□□□□ -1.72
CPNE3O75131 SERF1AP1-201ENST00000514575 187 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 RNU1-61P-201ENST00000516107 151 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 HIGD1AP1-201ENST00000550979 275 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 AL391261.3-201ENST00000557194 520 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 ATP5J2P6-201ENST00000565203 266 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.31□□□□□ -1.72
CPNE3O75131 AL138963.2-201ENST00000605137 226 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 MIR6716-201ENST00000613413 80 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 AC140113.4-201ENST00000622087 222 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CPNE3O75131 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CPNE3O75131 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CPNE3O75131 DHX9P1-201ENST00000436565 3076 ntBASIC4.31□□□□□ -1.72
CPNE3O75131 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.31□□□□□ -1.72
CPNE3O75131 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.3□□□□□ -1.72
CPNE3O75131 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.3□□□□□ -1.72
CPNE3O75131 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CPNE3O75131 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CPNE3O75131 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.3□□□□□ -1.72
CPNE3O75131 Y_RNA.29-201ENST00000362570 113 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 RNU1-83P-201ENST00000363426 164 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 Y_RNA.274-201ENST00000364714 101 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.3□□□□□ -1.72
CPNE3O75131 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.3□□□□□ -1.72
CPNE3O75131 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 RN7SKP49-201ENST00000516675 260 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 CKS1BP7-201ENST00000522230 235 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 UBL5P4-201ENST00000562584 236 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.3□□□□□ -1.72
CPNE3O75131 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.3□□□□□ -1.72
CPNE3O75131 AC024220.1-201ENST00000603675 484 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 U2.14-201ENST00000615943 113 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CPNE3O75131 AL079305.1-201ENST00000623159 3008 ntBASIC4.3□□□□□ -1.72
CPNE3O75131 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CPNE3O75131 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CPNE3O75131 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CPNE3O75131 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CPNE3O75131 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CPNE3O75131 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.29□□□□□ -1.72
CPNE3O75131 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CPNE3O75131 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.29□□□□□ -1.72
CPNE3O75131 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CPNE3O75131 RNU6-1159P-201ENST00000362933 107 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 RNU6-137P-201ENST00000363680 108 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 Y_RNA.200-201ENST00000364018 102 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 SNORA36A-201ENST00000384221 132 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 MIR487A-201ENST00000385009 80 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 RNU4-61P-201ENST00000411243 107 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 AC078809.1-201ENST00000427601 140 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 AC005300.1-201ENST00000428401 373 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 AL445305.1-201ENST00000432577 575 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.29□□□□□ -1.72
CPNE3O75131 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.29□□□□□ -1.72
CPNE3O75131 HMGN2P16-201ENST00000456802 261 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 RN7SL303P-201ENST00000469773 251 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.29□□□□□ -1.72
CPNE3O75131 AP001025.1-201ENST00000486139 332 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.29□□□□□ -1.72
CPNE3O75131 RNU5F-8P-201ENST00000515941 111 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 RNU6-1198P-201ENST00000516904 67 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 RNU6-58P-201ENST00000517143 103 ntBASIC4.29□□□□□ -1.72
CPNE3O75131 RN7SKP40-201ENST00000517211 242 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms