Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
SHOX2O60902 AC117532.1-201ENST00000514638 323 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.58□□□□□ -2.16
SHOX2O60902 AL606834.3-201ENST00000602615 496 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 SNRPGP17-201ENST00000603780 214 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 AC022202.1-201ENST00000613515 211 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SHOX2O60902 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 RNU5A-8P-201ENST00000364102 114 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 U8.10-201ENST00000384260 133 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 SNORD116-12-201ENST00000384468 92 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
SHOX2O60902 AC244636.1-201ENST00000421152 228 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.57□□□□□ -2.16
SHOX2O60902 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.57□□□□□ -2.16
SHOX2O60902 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.57□□□□□ -2.16
SHOX2O60902 MTND2P29-201ENST00000438595 412 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.57□□□□□ -2.16
SHOX2O60902 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.57□□□□□ -2.16
SHOX2O60902 TOMM22P6-201ENST00000465035 409 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.57□□□□□ -2.16
SHOX2O60902 RNU6-467P-201ENST00000517027 110 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 AP006587.4-201ENST00000526053 529 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.57□□□□□ -2.16
SHOX2O60902 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 ARL2BPP2-201ENST00000550907 489 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 RNU6-88P-201ENST00000606801 100 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.57□□□□□ -2.16
SHOX2O60902 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.57□□□□□ -2.16
SHOX2O60902 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.57□□□□□ -2.16
SHOX2O60902 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
SHOX2O60902 Y_RNA.30-201ENST00000362572 97 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 RNU6-288P-201ENST00000363690 104 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 Y_RNA.458-201ENST00000384240 102 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 Y_RNA.472-201ENST00000384322 102 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 MIR301A-201ENST00000385261 86 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SHOX2O60902 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SHOX2O60902 MIR1305-201ENST00000408300 86 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 AL445669.1-201ENST00000426743 755 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 VN1R108P-201ENST00000431580 830 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.56□□□□□ -2.16
SHOX2O60902 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.56□□□□□ -2.16
SHOX2O60902 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.56□□□□□ -2.16
SHOX2O60902 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.56□□□□□ -2.16
SHOX2O60902 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.56□□□□□ -2.16
SHOX2O60902 RNU6-953P-201ENST00000459154 107 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.56□□□□□ -2.16
SHOX2O60902 AC104629.1-201ENST00000494226 508 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.56□□□□□ -2.16
SHOX2O60902 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
SHOX2O60902 RNU6-572P-201ENST00000516724 80 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.56□□□□□ -2.16
SHOX2O60902 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.56□□□□□ -2.16
SHOX2O60902 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.56□□□□□ -2.16
SHOX2O60902 AC011712.1-201ENST00000588959 234 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 AL078605.1-201ENST00000603529 500 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.56□□□□□ -2.16
SHOX2O60902 AC099654.8-201ENST00000637757 681 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SHOX2O60902 AC099786.3-201ENST00000565735 1410 ntBASIC1.56□□□□□ -2.16
SHOX2O60902 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.56□□□□□ -2.16
SHOX2O60902 MIR598-201ENST00000384868 97 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 RNA5SP212-201ENST00000391223 107 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 BX510359.4-201ENST00000423750 193 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.55□□□□□ -2.16
SHOX2O60902 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.55□□□□□ -2.16
SHOX2O60902 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.55□□□□□ -2.16
SHOX2O60902 NEFMP1-201ENST00000443423 1006 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 AL358794.1-201ENST00000445689 381 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 ATP5J2P3-201ENST00000451550 258 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 RPL7P43-201ENST00000478876 753 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 AC018868.1-201ENST00000491307 315 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 RNU6-276P-201ENST00000516114 96 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 RNU6-678P-201ENST00000516832 109 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 OR5B19P-201ENST00000531766 928 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 AC011604.1-201ENST00000545978 196 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 DNAJC19P9-201ENST00000555084 351 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 MIR3683-201ENST00000580847 82 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 AC096720.1-201ENST00000604441 183 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SHOX2O60902 AC107952.2-201ENST00000606048 486 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 AC084768.2-201ENST00000622736 221 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 AC092125.1-201ENST00000562568 1995 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.55□□□□□ -2.16
SHOX2O60902 ZNF876P-202ENST00000398732 1485 ntBASIC1.55□□□□□ -2.16
SHOX2O60902 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
SHOX2O60902 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
SHOX2O60902 Y_RNA.354-201ENST00000365448 111 ntBASIC1.54□□□□□ -2.16
SHOX2O60902 RNU6-898P-201ENST00000365627 104 ntBASIC1.54□□□□□ -2.16
SHOX2O60902 SNORA8-201ENST00000384574 139 ntBASIC1.54□□□□□ -2.16
SHOX2O60902 MIR29C-201ENST00000385231 88 ntBASIC1.54□□□□□ -2.16
SHOX2O60902 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.54□□□□□ -2.16
SHOX2O60902 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
SHOX2O60902 MTND4P25-201ENST00000441039 533 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms