Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 CR383656.8-201ENST00000549046 145 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
GMDSO60547 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.55□□□□□ -2.16
GMDSO60547 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.55□□□□□ -2.16
GMDSO60547 MTCYBP23-201ENST00000558717 1102 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC092325.1-201ENST00000566449 554 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC022254.1-201ENST00000567857 235 ntBASIC1.55□□□□□ -2.16
GMDSO60547 MTND3P19-201ENST00000603825 345 ntBASIC1.55□□□□□ -2.16
GMDSO60547 CYP2C61P-201ENST00000604072 290 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC112187.2-201ENST00000604345 283 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC009318.2-201ENST00000610917 651 ntBASIC1.55□□□□□ -2.16
GMDSO60547 uc_338.12-201ENST00000616344 181 ntBASIC1.55□□□□□ -2.16
GMDSO60547 RN7SL853P-201ENST00000617250 223 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC090517.3-201ENST00000625170 141 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC004808.1-201ENST00000627671 721 ntBASIC1.55□□□□□ -2.16
GMDSO60547 AC233981.2-201ENST00000611524 1614 ntBASIC1.55□□□□□ -2.16
GMDSO60547 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
GMDSO60547 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.54□□□□□ -2.16
GMDSO60547 SMIM11P1-201ENST00000369586 178 ntBASIC1.54□□□□□ -2.16
GMDSO60547 RNU11-3P-201ENST00000391111 133 ntBASIC1.54□□□□□ -2.16
GMDSO60547 RNU4-22P-201ENST00000411058 166 ntBASIC1.54□□□□□ -2.16
GMDSO60547 UBE2V1P10-201ENST00000414685 269 ntBASIC1.54□□□□□ -2.16
GMDSO60547 AL365338.1-201ENST00000422282 858 ntBASIC1.54□□□□□ -2.16
GMDSO60547 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.54□□□□□ -2.16
GMDSO60547 AC112492.4-201ENST00000456549 352 ntBASIC1.54□□□□□ -2.16
GMDSO60547 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.54□□□□□ -2.16
GMDSO60547 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.54□□□□□ -2.16
GMDSO60547 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.54□□□□□ -2.16
GMDSO60547 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
GMDSO60547 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.54□□□□□ -2.16
GMDSO60547 AC011979.2-201ENST00000527568 352 ntBASIC1.54□□□□□ -2.16
GMDSO60547 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.54□□□□□ -2.16
GMDSO60547 AC144521.1-201ENST00000607148 956 ntBASIC1.54□□□□□ -2.16
GMDSO60547 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
GMDSO60547 AC093648.1-201ENST00000623546 606 ntBASIC1.54□□□□□ -2.16
GMDSO60547 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.54□□□□□ -2.16
GMDSO60547 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
GMDSO60547 MIR412-201ENST00000362142 91 ntBASIC1.53□□□□□ -2.16
GMDSO60547 RNU6-960P-201ENST00000364056 120 ntBASIC1.53□□□□□ -2.16
GMDSO60547 RNU5E-6P-201ENST00000365574 115 ntBASIC1.53□□□□□ -2.16
GMDSO60547 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
GMDSO60547 MIR29B2-201ENST00000385055 81 ntBASIC1.53□□□□□ -2.16
GMDSO60547 MIR1283-2-201ENST00000408621 87 ntBASIC1.53□□□□□ -2.16
GMDSO60547 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
GMDSO60547 PIGPP2-201ENST00000411569 458 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.53□□□□□ -2.16
GMDSO60547 AC016831.2-201ENST00000417179 352 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.53□□□□□ -2.16
GMDSO60547 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.53□□□□□ -2.16
GMDSO60547 USP9YP18-201ENST00000425912 695 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.53□□□□□ -2.16
GMDSO60547 HMGN2P3-201ENST00000433603 273 ntBASIC1.53□□□□□ -2.16
GMDSO60547 FARSBP1-201ENST00000435808 1778 ntBASIC1.53□□□□□ -2.16
GMDSO60547 HMGN2P5-201ENST00000436882 273 ntBASIC1.53□□□□□ -2.16
GMDSO60547 RPL7P54-201ENST00000438336 674 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AC003989.2-201ENST00000440224 169 ntBASIC1.53□□□□□ -2.16
GMDSO60547 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AL360221.1-201ENST00000445989 335 ntBASIC1.53□□□□□ -2.16
GMDSO60547 PTENP1-201ENST00000447117 1215 ntBASIC1.53□□□□□ -2.16
GMDSO60547 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.53□□□□□ -2.16
GMDSO60547 PRELID3BP1-201ENST00000457142 540 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.53□□□□□ -2.16
GMDSO60547 snoU13.15-201ENST00000459407 104 ntBASIC1.53□□□□□ -2.16
GMDSO60547 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.53□□□□□ -2.16
GMDSO60547 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.53□□□□□ -2.16
GMDSO60547 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.53□□□□□ -2.16
GMDSO60547 RNU6-970P-201ENST00000516312 107 ntBASIC1.53□□□□□ -2.16
GMDSO60547 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.53□□□□□ -2.16
GMDSO60547 AC022616.8-201ENST00000533569 253 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AP000873.5-201ENST00000533906 236 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.53□□□□□ -2.16
GMDSO60547 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.53□□□□□ -2.16
GMDSO60547 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.53□□□□□ -2.16
GMDSO60547 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.53□□□□□ -2.16
GMDSO60547 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.53□□□□□ -2.16
GMDSO60547 MIR3618-201ENST00000580330 88 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AC080013.3-201ENST00000606839 578 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AC130324.3-201ENST00000614165 542 ntBASIC1.53□□□□□ -2.16
GMDSO60547 AC092192.1-201ENST00000633154 1018 ntBASIC1.53□□□□□ -2.16
GMDSO60547 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
GMDSO60547 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
GMDSO60547 RNU6-511P-201ENST00000363496 107 ntBASIC1.52□□□□□ -2.17
GMDSO60547 RNU6-1210P-201ENST00000363775 107 ntBASIC1.52□□□□□ -2.17
GMDSO60547 U8.13-201ENST00000390842 128 ntBASIC1.52□□□□□ -2.17
GMDSO60547 SNORA40.18-201ENST00000391200 128 ntBASIC1.52□□□□□ -2.17
GMDSO60547 MIR1294-201ENST00000408503 142 ntBASIC1.52□□□□□ -2.17
GMDSO60547 Y_RNA.623-201ENST00000411128 95 ntBASIC1.52□□□□□ -2.17
GMDSO60547 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
GMDSO60547 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.52□□□□□ -2.17
GMDSO60547 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.52□□□□□ -2.17
GMDSO60547 AL627311.1-201ENST00000431514 115 ntBASIC1.52□□□□□ -2.17
GMDSO60547 AL365400.1-201ENST00000431854 640 ntBASIC1.52□□□□□ -2.17
GMDSO60547 MTCO3P5-201ENST00000433620 714 ntBASIC1.52□□□□□ -2.17
GMDSO60547 HSPE1P21-201ENST00000438283 308 ntBASIC1.52□□□□□ -2.17
GMDSO60547 AL606517.1-201ENST00000446914 387 ntBASIC1.52□□□□□ -2.17
GMDSO60547 AL031313.1-201ENST00000448435 256 ntBASIC1.52□□□□□ -2.17
GMDSO60547 SSXP1-201ENST00000453640 473 ntBASIC1.52□□□□□ -2.17
GMDSO60547 RPL21P99-201ENST00000480369 423 ntBASIC1.52□□□□□ -2.17
GMDSO60547 PTP4A1P4-201ENST00000512479 322 ntBASIC1.52□□□□□ -2.17
GMDSO60547 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms