Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.38□□□□□ -2.35
SSSCA1O60232 RNU6-1274P-201ENST00000384557 107 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
SSSCA1O60232 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 AC083875.1-201ENST00000419509 405 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 AL022400.1-201ENST00000423946 935 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.38□□□□□ -2.35
SSSCA1O60232 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SSSCA1O60232 MTND3P4-201ENST00000453537 303 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 HMGN2P9-201ENST00000476875 229 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 HMGN1P7-201ENST00000491722 313 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 AC134050.1-201ENST00000495088 933 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 PDCD5P2-201ENST00000507570 312 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.38□□□□□ -2.35
SSSCA1O60232 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.38□□□□□ -2.35
SSSCA1O60232 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.38□□□□□ -2.35
SSSCA1O60232 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.38□□□□□ -2.35
SSSCA1O60232 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.38□□□□□ -2.35
SSSCA1O60232 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.38□□□□□ -2.35
SSSCA1O60232 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.38□□□□□ -2.35
SSSCA1O60232 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.38□□□□□ -2.35
SSSCA1O60232 AC015688.6-201ENST00000577737 104 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 BNIP3P24-201ENST00000593398 557 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 AC096772.1-201ENST00000609146 564 ntBASIC0.38□□□□□ -2.35
SSSCA1O60232 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.38□□□□□ -2.35
SSSCA1O60232 Y_RNA.99-201ENST00000363138 105 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 RNA5SP493-201ENST00000364115 91 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 RNU6-743P-201ENST00000364151 106 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 RNU6-296P-201ENST00000384608 107 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 MIR605-201ENST00000385078 83 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.37□□□□□ -2.35
SSSCA1O60232 AC114482.1-201ENST00000418010 247 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.37□□□□□ -2.35
SSSCA1O60232 AL589872.1-201ENST00000426602 288 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 Z82205.1-201ENST00000428456 297 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 SNRPEP7-201ENST00000438350 220 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 AC092170.1-201ENST00000440211 356 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 MTND2P4-201ENST00000445034 1004 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 OR6C5P-201ENST00000452388 923 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.37□□□□□ -2.35
SSSCA1O60232 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.37□□□□□ -2.35
SSSCA1O60232 AC013267.1-201ENST00000458227 267 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 AC034244.1-201ENST00000507687 207 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 RNU6-885P-201ENST00000516607 104 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.37□□□□□ -2.35
SSSCA1O60232 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.37□□□□□ -2.35
SSSCA1O60232 AC023824.3-201ENST00000569003 562 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 AC008751.2-201ENST00000597885 980 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 AC011451.2-201ENST00000604303 598 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 snoU13.31-201ENST00000607291 104 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 U6.101-201ENST00000637707 76 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 MTND5P35-201ENST00000557537 1720 ntBASIC0.37□□□□□ -2.35
SSSCA1O60232 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.36□□□□□ -2.35
SSSCA1O60232 AC068700.1-201ENST00000565862 3754 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 NACAP2-201ENST00000318548 624 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SSSCA1O60232 MIR10B-201ENST00000385011 110 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 RNU6-482P-201ENST00000391068 107 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 RNU2-28P-201ENST00000410457 189 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 UBE2V1P11-201ENST00000411559 285 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.36□□□□□ -2.35
SSSCA1O60232 AC010099.3-201ENST00000423896 409 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AC093422.3-201ENST00000428506 305 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AL592045.1-201ENST00000429867 352 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 CBX3P6-201ENST00000430257 527 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.36□□□□□ -2.35
SSSCA1O60232 TOMM22P6-201ENST00000465035 409 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.36□□□□□ -2.35
SSSCA1O60232 AC116655.1-201ENST00000508324 901 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 RNU6-965P-201ENST00000516721 96 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.36□□□□□ -2.35
SSSCA1O60232 MRPS36P5-201ENST00000551909 298 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 MIR3169-201ENST00000578032 83 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.36□□□□□ -2.35
SSSCA1O60232 AC012065.4-201ENST00000602445 679 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AC016727.1-205ENST00000605437 569 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AC112220.2-201ENST00000605513 533 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AC107952.2-201ENST00000606048 486 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AC009229.3-201ENST00000608056 282 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 AC009269.6-201ENST00000621778 588 ntBASIC0.36□□□□□ -2.35
SSSCA1O60232 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SSSCA1O60232 AC138393.1-203ENST00000327086 343 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 RNU6-1280P-201ENST00000365211 107 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 MIR520E-201ENST00000384867 87 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
SSSCA1O60232 RAC1P8-201ENST00000427086 527 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 KATNBL1P3-201ENST00000443475 909 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 VN1R10P-201ENST00000447106 875 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SSSCA1O60232 AF131216.2-201ENST00000512316 564 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 AC074344.1-201ENST00000512823 224 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SSSCA1O60232 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 RNA5SP384-201ENST00000516615 116 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 AC090142.3-201ENST00000519012 385 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.35□□□□□ -2.35
SSSCA1O60232 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.35□□□□□ -2.35
SSSCA1O60232 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms