Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC005476.1-201ENST00000554427 397 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.21□□□□□ -1.74
SRGAP3O43295 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.21□□□□□ -1.74
SRGAP3O43295 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.21□□□□□ -1.74
SRGAP3O43295 LRRC37A5P-203ENST00000580181 585 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 AC004805.2-201ENST00000605382 482 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 AL512643.1-201ENST00000635735 524 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SRGAP3O43295 AC233263.6-201ENST00000631132 1963 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SRGAP3O43295 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.21□□□□□ -1.74
SRGAP3O43295 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SRGAP3O43295 AC005183.1-201ENST00000603687 1979 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 RNY1P16-201ENST00000363063 111 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 Y_RNA.222-201ENST00000364264 102 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 Y_RNA.350-201ENST00000365409 98 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 RNU6-1179P-201ENST00000384667 107 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 AL138885.1-201ENST00000405921 675 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 RNU6-325P-201ENST00000411132 105 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.2□□□□□ -1.74
SRGAP3O43295 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.2□□□□□ -1.74
SRGAP3O43295 AL592045.1-201ENST00000429867 352 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 MTND2P29-201ENST00000438595 412 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 RNU6-1132P-201ENST00000459214 107 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 RPL7P49-201ENST00000471402 708 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 RPL21P13-201ENST00000488305 481 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 AC113155.1-201ENST00000511141 769 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 SNORD116-26-201ENST00000516006 96 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 Y_RNA.680-201ENST00000516441 93 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.2□□□□□ -1.74
SRGAP3O43295 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.2□□□□□ -1.74
SRGAP3O43295 MIR3976-201ENST00000606807 139 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 AL591516.1-201ENST00000611326 274 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 Z99571.1-201ENST00000636677 394 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.2□□□□□ -1.74
SRGAP3O43295 MTND5P27-201ENST00000428871 1720 ntBASIC4.2□□□□□ -1.74
SRGAP3O43295 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SRGAP3O43295 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.19□□□□□ -1.74
SRGAP3O43295 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
SRGAP3O43295 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SRGAP3O43295 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SRGAP3O43295 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SRGAP3O43295 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SRGAP3O43295 RNU6-209P-201ENST00000384118 107 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 Y_RNA.483-201ENST00000384380 101 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 Y_RNA.534-201ENST00000384599 112 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SRGAP3O43295 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 RNU2-38P-201ENST00000410856 79 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 PGBD4P6-201ENST00000421501 610 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.19□□□□□ -1.74
SRGAP3O43295 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.19□□□□□ -1.74
SRGAP3O43295 AC073910.1-201ENST00000445047 438 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 Y_RNA.687-201ENST00000516558 91 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 RNU7-4P-201ENST00000516961 62 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.19□□□□□ -1.74
SRGAP3O43295 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.19□□□□□ -1.74
SRGAP3O43295 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.19□□□□□ -1.74
SRGAP3O43295 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.19□□□□□ -1.74
SRGAP3O43295 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SRGAP3O43295 AC010615.1-201ENST00000594254 1764 ntBASIC4.19□□□□□ -1.74
SRGAP3O43295 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SRGAP3O43295 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SRGAP3O43295 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
SRGAP3O43295 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SRGAP3O43295 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.18□□□□□ -1.74
SRGAP3O43295 Y_RNA.60-201ENST00000362831 98 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 Y_RNA.324-201ENST00000365165 102 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 SNORA51.11-201ENST00000384442 131 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 RNVU1-14-201ENST00000384770 164 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 MIR625-201ENST00000385047 85 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 MT-TW-201ENST00000387382 68 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 RNU6-607P-201ENST00000411283 108 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 AC126124.2-201ENST00000413542 321 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 UBE2D3P2-201ENST00000424409 445 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 AC017083.1-201ENST00000428093 483 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.18□□□□□ -1.74
SRGAP3O43295 RPL23AP67-201ENST00000465341 474 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 AC074250.1-201ENST00000511117 192 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 RNU6-397P-201ENST00000516226 104 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 SNORA40.15-201ENST00000516884 107 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.18□□□□□ -1.74
SRGAP3O43295 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.18□□□□□ -1.74
SRGAP3O43295 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.18□□□□□ -1.74
SRGAP3O43295 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.18□□□□□ -1.74
SRGAP3O43295 AL161713.1-201ENST00000555538 145 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 MIR4276-201ENST00000584832 70 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 AL121917.1-203ENST00000605534 577 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 MIR1244-1-201ENST00000612829 85 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 RNVU1-4-201ENST00000612985 164 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 MIR1244-3-201ENST00000635744 85 ntBASIC4.18□□□□□ -1.74
SRGAP3O43295 MIR1244-2-201ENST00000636449 85 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms