Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH17O14917 AC025518.1-201ENST00000479856 347 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 MTCO1P29-201ENST00000496868 288 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 SNORD19.2-201ENST00000516978 73 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 AC006199.1-201ENST00000548728 219 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 AC025423.5-201ENST00000550230 219 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH17O14917 AC073657.2-201ENST00000605661 303 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 AC004832.5-201ENST00000608677 401 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 FAM157A-202ENST00000615155 405 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH17O14917 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH17O14917 MIR8057-201ENST00000620957 69 ntBASIC3.21□□□□□ -1.9
PCDH17O14917 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH17O14917 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH17O14917 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH17O14917 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 RNU6-1252P-201ENST00000363054 104 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 RNU6-799P-201ENST00000363567 107 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 Y_RNA.212-201ENST00000364177 102 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 SNORA48.2-201ENST00000390926 124 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH17O14917 AC016831.2-201ENST00000417179 352 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 RPL21P40-201ENST00000428586 483 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH17O14917 SNAP23P1-201ENST00000433229 246 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AC125238.1-201ENST00000448842 249 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH17O14917 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDH17O14917 RNU7-30P-201ENST00000516835 62 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 IGKV2-26-201ENST00000518305 343 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH17O14917 AC025281.1-201ENST00000567026 265 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDH17O14917 AC100830.2-201ENST00000581636 240 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AC023043.2-201ENST00000589678 1026 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AC005261.5-201ENST00000596280 355 ntBASIC3.2□□□□□ -1.9
PCDH17O14917 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH17O14917 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH17O14917 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH17O14917 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH17O14917 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH17O14917 RNU6-1280P-201ENST00000365211 107 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 DYNLT3P1-201ENST00000378574 347 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH17O14917 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH17O14917 UBE2V1P4-201ENST00000425374 344 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH17O14917 AC093019.1-201ENST00000443135 252 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH17O14917 AC233279.1-201ENST00000455300 423 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AC091951.2-201ENST00000500762 203 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AC114781.4-201ENST00000513707 639 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 RNU6-875P-201ENST00000516488 106 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 RNU6-1332P-201ENST00000516666 104 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH17O14917 DNAJC8P1-201ENST00000554535 372 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 SCOCP1-201ENST00000554676 349 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AL121821.2-201ENST00000556081 394 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH17O14917 Y_RNA.804-201ENST00000615262 101 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AC104260.1-201ENST00000616660 539 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 AC099654.5-201ENST00000636479 350 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH17O14917 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
PCDH17O14917 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH17O14917 AC004944.1-201ENST00000517807 3059 ntBASIC3.19□□□□□ -1.9
PCDH17O14917 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH17O14917 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH17O14917 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH17O14917 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH17O14917 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
PCDH17O14917 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-37P-201ENST00000362692 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-11P-201ENST00000364234 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-7-201ENST00000364784 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU1-100P-201ENST00000365255 165 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-8-201ENST00000365467 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-25P-201ENST00000383873 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-1-201ENST00000383898 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-1027P-201ENST00000383998 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-48P-201ENST00000384161 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-36P-201ENST00000384172 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-4P-201ENST00000384205 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-5P-201ENST00000384238 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-3P-201ENST00000384314 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-16P-201ENST00000384385 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-15P-201ENST00000384534 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-2-201ENST00000384627 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-29P-201ENST00000384637 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-9-201ENST00000384776 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-33P-201ENST00000384793 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNA5SP354-201ENST00000391247 136 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU4-47P-201ENST00000410876 114 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AL356968.1-201ENST00000416622 474 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 PDCL2P1-201ENST00000419302 352 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms