Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-968P-201ENST00000384076 107 ntBASIC0.63□□□□□ -2.31
CHD1O14646 RNU6-748P-201ENST00000384648 107 ntBASIC0.63□□□□□ -2.31
CHD1O14646 RNU2-49P-201ENST00000410666 184 ntBASIC0.63□□□□□ -2.31
CHD1O14646 UBE2V2P3-201ENST00000433562 437 ntBASIC0.63□□□□□ -2.31
CHD1O14646 USP9YP24-201ENST00000434374 697 ntBASIC0.63□□□□□ -2.31
CHD1O14646 MTCO2P20-201ENST00000437339 673 ntBASIC0.63□□□□□ -2.31
CHD1O14646 RAB11AP1-201ENST00000442978 646 ntBASIC0.63□□□□□ -2.31
CHD1O14646 AC068135.1-201ENST00000446164 246 ntBASIC0.63□□□□□ -2.31
CHD1O14646 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.63□□□□□ -2.31
CHD1O14646 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD1O14646 BNIP3P23-201ENST00000599655 511 ntBASIC0.63□□□□□ -2.31
CHD1O14646 AL022067.1-201ENST00000602426 454 ntBASIC0.63□□□□□ -2.31
CHD1O14646 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHD1O14646 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD1O14646 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHD1O14646 AL022718.1-201ENST00000412004 84 ntBASIC0.62□□□□□ -2.31
CHD1O14646 Z82210.1-201ENST00000440037 231 ntBASIC0.62□□□□□ -2.31
CHD1O14646 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD1O14646 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.62□□□□□ -2.31
CHD1O14646 RPL36AP48-201ENST00000485521 314 ntBASIC0.62□□□□□ -2.31
CHD1O14646 RNU6-491P-201ENST00000516099 110 ntBASIC0.62□□□□□ -2.31
CHD1O14646 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHD1O14646 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.62□□□□□ -2.31
CHD1O14646 AC007792.1-201ENST00000623023 402 ntBASIC0.62□□□□□ -2.31
CHD1O14646 RNU6-884P-201ENST00000363889 107 ntBASIC0.61□□□□□ -2.31
CHD1O14646 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD1O14646 RNU6-444P-201ENST00000383988 108 ntBASIC0.61□□□□□ -2.31
CHD1O14646 SNORA50A-201ENST00000384225 134 ntBASIC0.61□□□□□ -2.31
CHD1O14646 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CHD1O14646 RNU2-43P-201ENST00000410306 190 ntBASIC0.61□□□□□ -2.31
CHD1O14646 RNU2-15P-201ENST00000410692 191 ntBASIC0.61□□□□□ -2.31
CHD1O14646 AC010385.1-201ENST00000412374 256 ntBASIC0.61□□□□□ -2.31
CHD1O14646 CR769776.1-201ENST00000441254 787 ntBASIC0.61□□□□□ -2.31
CHD1O14646 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.61□□□□□ -2.31
CHD1O14646 SNORD116-28-201ENST00000516123 91 ntBASIC0.61□□□□□ -2.31
CHD1O14646 RNU7-40P-201ENST00000516397 64 ntBASIC0.61□□□□□ -2.31
CHD1O14646 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD1O14646 AC136932.1-201ENST00000574771 208 ntBASIC0.61□□□□□ -2.31
CHD1O14646 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD1O14646 AL391516.1-201ENST00000554380 2449 ntBASIC0.61□□□□□ -2.31
CHD1O14646 SNORA51.6-201ENST00000384151 125 ntBASIC0.61□□□□□ -2.31
CHD1O14646 ZNF863P-201ENST00000426746 417 ntBASIC0.61□□□□□ -2.31
CHD1O14646 AC098831.1-201ENST00000440661 216 ntBASIC0.61□□□□□ -2.31
CHD1O14646 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD1O14646 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.61□□□□□ -2.31
CHD1O14646 AC011374.2-201ENST00000607135 526 ntBASIC0.61□□□□□ -2.31
CHD1O14646 MTCO1P23-201ENST00000415223 1526 ntBASIC0.61□□□□□ -2.31
CHD1O14646 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CHD1O14646 RNU1-124P-201ENST00000363861 145 ntBASIC0.6□□□□□ -2.31
CHD1O14646 RNU6-26P-201ENST00000383985 107 ntBASIC0.6□□□□□ -2.31
CHD1O14646 AL591043.1-201ENST00000432461 424 ntBASIC0.6□□□□□ -2.31
CHD1O14646 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.6□□□□□ -2.31
CHD1O14646 AC245102.2-201ENST00000448956 180 ntBASIC0.6□□□□□ -2.31
CHD1O14646 AL441985.1-201ENST00000457727 251 ntBASIC0.6□□□□□ -2.31
CHD1O14646 SCARNA15.2-201ENST00000516409 127 ntBASIC0.6□□□□□ -2.31
CHD1O14646 SCARNA16.2-201ENST00000516520 172 ntBASIC0.6□□□□□ -2.31
CHD1O14646 ZNF705CP-201ENST00000530515 889 ntBASIC0.6□□□□□ -2.31
CHD1O14646 AC009268.1-201ENST00000561352 1203 ntBASIC0.6□□□□□ -2.31
CHD1O14646 AC090079.2-201ENST00000575289 768 ntBASIC0.6□□□□□ -2.31
CHD1O14646 AC021171.1-201ENST00000603137 706 ntBASIC0.6□□□□□ -2.31
CHD1O14646 ELOCP5-201ENST00000604924 333 ntBASIC0.6□□□□□ -2.31
CHD1O14646 AC016542.1-201ENST00000608259 493 ntBASIC0.6□□□□□ -2.31
CHD1O14646 Y_RNA.136-201ENST00000363444 102 ntBASIC0.59□□□□□ -2.31
CHD1O14646 MIR100-201ENST00000385259 80 ntBASIC0.59□□□□□ -2.31
CHD1O14646 USP9YP26-201ENST00000421008 661 ntBASIC0.59□□□□□ -2.31
CHD1O14646 AC097463.2-201ENST00000421074 142 ntBASIC0.59□□□□□ -2.31
CHD1O14646 USP9YP18-201ENST00000425912 695 ntBASIC0.59□□□□□ -2.31
CHD1O14646 RPP40P1-201ENST00000426762 456 ntBASIC0.59□□□□□ -2.31
CHD1O14646 AL606489.2-201ENST00000433886 234 ntBASIC0.59□□□□□ -2.31
CHD1O14646 USP9YP17-201ENST00000444617 696 ntBASIC0.59□□□□□ -2.31
CHD1O14646 MTND2P24-201ENST00000453434 806 ntBASIC0.59□□□□□ -2.31
CHD1O14646 AC108729.1-201ENST00000487812 947 ntBASIC0.59□□□□□ -2.31
CHD1O14646 AP006587.4-201ENST00000526053 529 ntBASIC0.59□□□□□ -2.31
CHD1O14646 AC018618.2-201ENST00000604770 446 ntBASIC0.59□□□□□ -2.31
CHD1O14646 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.59□□□□□ -2.31
CHD1O14646 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.59□□□□□ -2.31
CHD1O14646 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.59□□□□□ -2.31
CHD1O14646 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.59□□□□□ -2.31
CHD1O14646 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CHD1O14646 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.58□□□□□ -2.32
CHD1O14646 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CHD1O14646 SNORA29-201ENST00000384183 140 ntBASIC0.58□□□□□ -2.32
CHD1O14646 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CHD1O14646 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.58□□□□□ -2.32
CHD1O14646 AC136628.3-201ENST00000521868 290 ntBASIC0.58□□□□□ -2.32
CHD1O14646 AC023050.2-201ENST00000544968 387 ntBASIC0.58□□□□□ -2.32
CHD1O14646 CYB5AP5-201ENST00000549779 389 ntBASIC0.58□□□□□ -2.32
CHD1O14646 AC090115.3-201ENST00000553218 849 ntBASIC0.58□□□□□ -2.32
CHD1O14646 MIR4661-201ENST00000582720 75 ntBASIC0.58□□□□□ -2.32
CHD1O14646 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CHD1O14646 AP003400.6-201ENST00000624698 740 ntBASIC0.58□□□□□ -2.32
CHD1O14646 MTCO3P5-201ENST00000433620 714 ntBASIC0.58□□□□□ -2.32
CHD1O14646 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.58□□□□□ -2.32
CHD1O14646 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.58□□□□□ -2.32
CHD1O14646 ACA64.5-201ENST00000516207 127 ntBASIC0.58□□□□□ -2.32
CHD1O14646 RNA5SP291-201ENST00000517222 105 ntBASIC0.58□□□□□ -2.32
CHD1O14646 HIGD1AP6-201ENST00000521833 279 ntBASIC0.58□□□□□ -2.32
CHD1O14646 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.58□□□□□ -2.32
CHD1O14646 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.58□□□□□ -2.32
CHD1O14646 MTND1P37-201ENST00000636562 264 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms