Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX1O00570 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SOX1O00570 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX1O00570 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX1O00570 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX1O00570 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX1O00570 AC009541.1-201ENST00000438279 2662 ntBASIC4.43□□□□□ -1.7
SOX1O00570 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX1O00570 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX1O00570 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX1O00570 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX1O00570 Y_RNA.122-201ENST00000363331 96 ntBASIC4.43□□□□□ -1.7
SOX1O00570 RNY4P28-201ENST00000365281 93 ntBASIC4.43□□□□□ -1.7
SOX1O00570 SNORD113-1-201ENST00000365321 69 ntBASIC4.43□□□□□ -1.7
SOX1O00570 RNU6-741P-201ENST00000383889 107 ntBASIC4.43□□□□□ -1.7
SOX1O00570 RNU6-72P-201ENST00000384285 79 ntBASIC4.43□□□□□ -1.7
SOX1O00570 Y_RNA.504-201ENST00000384481 104 ntBASIC4.43□□□□□ -1.7
SOX1O00570 MIR490-201ENST00000384865 128 ntBASIC4.43□□□□□ -1.7
SOX1O00570 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX1O00570 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX1O00570 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX1O00570 KC877373.1-201ENST00000479066 408 ntBASIC4.43□□□□□ -1.7
SOX1O00570 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX1O00570 RNU6-861P-201ENST00000516745 106 ntBASIC4.43□□□□□ -1.7
SOX1O00570 AC037487.3-201ENST00000606668 112 ntBASIC4.43□□□□□ -1.7
SOX1O00570 RMST_6.1-201ENST00000611980 203 ntBASIC4.43□□□□□ -1.7
SOX1O00570 AC090132.2-201ENST00000615881 347 ntBASIC4.43□□□□□ -1.7
SOX1O00570 AL672167.1-204ENST00000641875 3017 ntBASIC4.43□□□□□ -1.7
SOX1O00570 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX1O00570 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
SOX1O00570 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX1O00570 ZNF826P-207ENST00000622273 1910 ntBASIC4.42□□□□□ -1.7
SOX1O00570 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX1O00570 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX1O00570 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SOX1O00570 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SOX1O00570 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 RNA5SP240-201ENST00000365355 128 ntBASIC4.42□□□□□ -1.7
SOX1O00570 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SOX1O00570 RNU6-493P-201ENST00000391321 108 ntBASIC4.42□□□□□ -1.7
SOX1O00570 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX1O00570 RPL27AP8-201ENST00000424277 446 ntBASIC4.42□□□□□ -1.7
SOX1O00570 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX1O00570 AC098614.2-201ENST00000426040 255 ntBASIC4.42□□□□□ -1.7
SOX1O00570 AL590383.1-201ENST00000428602 75 ntBASIC4.42□□□□□ -1.7
SOX1O00570 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX1O00570 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX1O00570 AC010285.1-201ENST00000470580 392 ntBASIC4.42□□□□□ -1.7
SOX1O00570 MRPL42P6-201ENST00000486397 371 ntBASIC4.42□□□□□ -1.7
SOX1O00570 HMGB3P16-201ENST00000508037 287 ntBASIC4.42□□□□□ -1.7
SOX1O00570 RNU2-31P-201ENST00000516954 155 ntBASIC4.42□□□□□ -1.7
SOX1O00570 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX1O00570 GNRHR2P1-201ENST00000555315 631 ntBASIC4.42□□□□□ -1.7
SOX1O00570 MZT1P2-201ENST00000604387 248 ntBASIC4.42□□□□□ -1.7
SOX1O00570 AC072026.1-201ENST00000605023 201 ntBASIC4.42□□□□□ -1.7
SOX1O00570 BRDTP1-201ENST00000605735 677 ntBASIC4.42□□□□□ -1.7
SOX1O00570 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.42□□□□□ -1.7
SOX1O00570 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SOX1O00570 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX1O00570 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX1O00570 HAUS6P2-201ENST00000433254 2404 ntBASIC4.42□□□□□ -1.7
SOX1O00570 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX1O00570 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX1O00570 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SOX1O00570 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX1O00570 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX1O00570 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SOX1O00570 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX1O00570 RNU6-222P-201ENST00000362438 107 ntBASIC4.41□□□□□ -1.7
SOX1O00570 RNU6-105P-201ENST00000363909 104 ntBASIC4.41□□□□□ -1.7
SOX1O00570 Y_RNA.292-201ENST00000364904 97 ntBASIC4.41□□□□□ -1.7
SOX1O00570 RNU6-968P-201ENST00000384076 107 ntBASIC4.41□□□□□ -1.7
SOX1O00570 RNU6-843P-201ENST00000384454 104 ntBASIC4.41□□□□□ -1.7
SOX1O00570 RNU5A-5P-201ENST00000411054 116 ntBASIC4.41□□□□□ -1.7
SOX1O00570 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
SOX1O00570 EIF1P2-201ENST00000428233 350 ntBASIC4.41□□□□□ -1.7
SOX1O00570 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX1O00570 BTF3P6-201ENST00000448054 499 ntBASIC4.41□□□□□ -1.7
SOX1O00570 AL353705.4-201ENST00000449661 238 ntBASIC4.41□□□□□ -1.7
SOX1O00570 RN7SL807P-201ENST00000470923 297 ntBASIC4.41□□□□□ -1.7
SOX1O00570 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.41□□□□□ -1.7
SOX1O00570 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.41□□□□□ -1.7
SOX1O00570 MIR548AI-201ENST00000579940 88 ntBASIC4.41□□□□□ -1.7
SOX1O00570 AL162424.1-201ENST00000602325 221 ntBASIC4.41□□□□□ -1.7
SOX1O00570 RPL23AP88-201ENST00000605759 454 ntBASIC4.41□□□□□ -1.7
SOX1O00570 AC099506.2-201ENST00000623074 221 ntBASIC4.41□□□□□ -1.7
SOX1O00570 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX1O00570 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX1O00570 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
SOX1O00570 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX1O00570 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX1O00570 AC007390.2-201ENST00000606229 3803 ntBASIC4.41□□□□□ -1.7
SOX1O00570 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX1O00570 MAPK10-320ENST00000641462 6696 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms