Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SPDYE4A6NLX3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 OR56B2P-202ENST00000641377 2453 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 RNU1-150P-201ENST00000362491 162 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 RNU105B-201ENST00000364478 208 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 RNA5SP125-201ENST00000364843 120 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 AC016739.1-201ENST00000405359 345 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 EDDM3CP-201ENST00000415977 425 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 BX510359.3-201ENST00000422168 306 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 SNORA18.4-201ENST00000516440 124 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 RNU1-104P-201ENST00000517280 175 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 PRELID2P1-201ENST00000552837 301 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 MIR3176-201ENST00000582210 90 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 AC007496.3-201ENST00000624987 3443 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 AL353796.1-201ENST00000561542 3241 ntBASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SPDYE4A6NLX3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 Y_RNA.85-201ENST00000363014 111 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 Y_RNA.163-201ENST00000363702 113 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 SNORA51.5-201ENST00000384126 131 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 RNU6-49P-201ENST00000384256 107 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 MIR1263-201ENST00000408324 86 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 EEF1B2P6-201ENST00000445713 673 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 AL441985.1-201ENST00000457727 251 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 RPS26P55-201ENST00000471178 356 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 RN7SL466P-201ENST00000497546 295 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 AC007012.1-201ENST00000567192 175 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 AC097639.2-201ENST00000603159 172 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 SUMO2P15-201ENST00000604285 278 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 RPL17P51-201ENST00000605218 238 ntBASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SPDYE4A6NLX3 AC069528.2-201ENST00000624849 1991 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 Z95114.1-201ENST00000624264 14574 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 SELENOWP1-201ENST00000322792 252 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 RNU6-50P-201ENST00000362356 103 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 Y_RNA.52-201ENST00000362760 96 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 RN7SKP160-201ENST00000363804 340 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 Y_RNA.634-201ENST00000364811 113 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 SNORD12C-201ENST00000386307 89 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 MIR3065-201ENST00000390137 79 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 SNORA40.13-201ENST00000516379 120 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 AC093732.2-201ENST00000607950 274 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 AC069200.1-201ENST00000609511 323 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 AC009831.4-201ENST00000620744 325 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 AC073308.1-201ENST00000623696 305 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 ADAM5-202ENST00000399789 1942 ntBASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.31□□□□□ -1.4
SPDYE4A6NLX3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 OR13C1P-202ENST00000641378 2919 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 SNORA27.1-201ENST00000362604 124 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 AL021397.1-201ENST00000451806 248 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 AL645939.1-201ENST00000453429 797 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 FRG2FP-204ENST00000453982 852 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 AC023449.1-201ENST00000454464 154 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 ABCC13-202ENST00000463099 3842 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 RN7SL610P-201ENST00000463845 291 ntBASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPDYE4A6NLX3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.29□□□□□ -1.4
SPDYE4A6NLX3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SPDYE4A6NLX3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPDYE4A6NLX3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SPDYE4A6NLX3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPDYE4A6NLX3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms