Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 RNU4-82P-201ENST00000362443 140 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 RNU6-942P-201ENST00000363002 107 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.197-201ENST00000364004 102 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.326-201ENST00000365176 113 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 RNU6-827P-201ENST00000365553 106 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 SNORA75.6-201ENST00000391318 127 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 AL592291.1-201ENST00000403830 352 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 RNU6-325P-201ENST00000411132 105 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 RPL31P12-201ENST00000422587 358 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 HMGN2P10-201ENST00000448085 265 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 AL031274.1-201ENST00000450334 232 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 AC010265.1-201ENST00000513509 211 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 RN7SKP46-201ENST00000515942 234 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 MIR3162-201ENST00000581818 82 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 AL139395.1-201ENST00000603662 160 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 PISRT1.1-201ENST00000616930 107 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 AL136360.1-201ENST00000503377 1900 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 UBE3AP2-201ENST00000429033 2259 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 RNA5SP502-201ENST00000362694 119 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 RNU6-898P-201ENST00000365627 104 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.404-201ENST00000383978 102 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AC010099.1-201ENST00000455434 375 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AC022432.1-201ENST00000595739 310 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AC093732.2-201ENST00000607950 274 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.812-201ENST00000610788 101 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.784-201ENST00000613803 101 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.787-201ENST00000616522 101 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 AL158196.1-201ENST00000616786 434 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.780-201ENST00000617336 101 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.801-201ENST00000619005 101 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 MTND5P19-201ENST00000424872 1794 ntBASIC4.11□□□□□ -1.75
CCDC85CA6NKD9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 RNU6-1040P-201ENST00000383974 107 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 RNU6-842P-201ENST00000384269 107 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 MIR548P-201ENST00000408336 84 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 RNU6-174P-201ENST00000410406 106 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 RNU6-1077P-201ENST00000410506 102 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 USMG5P1-201ENST00000425964 177 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AC133473.1-201ENST00000455173 299 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 RPL30P15-201ENST00000457129 321 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 snoU109.2-201ENST00000459316 135 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.631-201ENST00000459607 101 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 RPL23AP14-201ENST00000468281 468 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AC018437.1-201ENST00000492214 406 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 SNORA43.2-201ENST00000516652 128 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 RNU6-1213P-201ENST00000517075 94 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AC091544.4-201ENST00000555268 342 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 AL121821.2-201ENST00000556081 394 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 SNRPGP17-201ENST00000603780 214 ntBASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC85CA6NKD9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.112-201ENST00000363250 102 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 RNU1-100P-201ENST00000365255 165 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 RNU6-474P-201ENST00000384243 107 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 SNORD17-201ENST00000390930 237 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 MIR921-201ENST00000401133 56 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 RNU6-1304P-201ENST00000411374 106 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 RNU7-23P-201ENST00000459465 62 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 U8.21-201ENST00000459536 136 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 RPS29P20-201ENST00000489592 171 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms