Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TRAV28-201ENST00000557548 323 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR5004-201ENST00000579078 107 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AC006023.2-201ENST00000609916 167 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AC012314.7-201ENST00000619693 93 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AL049641.1-201ENST00000441055 1948 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA63.1-201ENST00000362493 131 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.404-201ENST00000383978 102 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-639P-201ENST00000384074 107 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-306P-201ENST00000384617 107 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AL445529.1-201ENST00000398713 389 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR1183-201ENST00000408856 89 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 USP9YP30-201ENST00000430729 455 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 MYL8P-204ENST00000431574 518 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AL358232.1-201ENST00000448030 501 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 NDUFB1P2-201ENST00000449477 176 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU7-187P-201ENST00000458985 68 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR2053-201ENST00000459295 91 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 RPS23P3-201ENST00000470993 430 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 RPL7P42-201ENST00000481005 679 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AC104576.1-201ENST00000524225 88 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR1254-2-201ENST00000579553 63 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AC069200.1-201ENST00000609511 323 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 AC092608.2-201ENST00000624427 218 ntBASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV5S1A1TA0A578 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.151-201ENST00000363566 112 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-890P-201ENST00000384121 107 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.473-201ENST00000384333 102 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR7-3-201ENST00000384898 110 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORD73A-201ENST00000386062 65 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORD67-201ENST00000390833 111 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-308P-201ENST00000390957 107 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA75.6-201ENST00000391318 127 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RNA5SP129-201ENST00000410276 118 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RN7SKP27-201ENST00000410684 333 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AL096701.2-201ENST00000416920 238 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 Z82210.1-201ENST00000440037 231 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 PCMTD1P1-201ENST00000455560 355 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RN7SL75P-201ENST00000461926 281 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AC074250.1-201ENST00000511117 192 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-307P-201ENST00000516743 106 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 RNA5SP468-201ENST00000516782 93 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AC025755.1-201ENST00000521306 278 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 OR5D17P-201ENST00000531492 978 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 AC011890.2-201ENST00000613393 294 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 PLCE1P1-201ENST00000622094 305 ntBASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV5S1A1TA0A578 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.2-201ENST00000362330 96 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.5-201ENST00000362334 102 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.145-201ENST00000363527 102 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-384P-201ENST00000364900 104 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR517A-201ENST00000385001 87 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-1106P-201ENST00000390845 107 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-1197P-201ENST00000391183 107 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU2-68P-201ENST00000410878 191 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.623-201ENST00000411128 95 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 AL592148.1-201ENST00000413568 445 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 USMG5P1-201ENST00000425964 177 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 TOMM20P4-201ENST00000427861 435 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 AL627311.1-201ENST00000431514 115 ntBASIC3.22□□□□□ -1.89
TCRBV5S1A1TA0A578 AL035666.1-201ENST00000446195 348 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms