Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MTCO3P38-201ENST00000468910 766 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6-718P-201ENST00000516166 105 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6-826P-201ENST00000516827 104 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC004486.1-201ENST00000546846 233 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC090115.3-201ENST00000553218 849 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 OR11H5P-201ENST00000554039 926 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL118558.2-201ENST00000556294 238 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC106782.4-201ENST00000568264 210 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MIR3941-201ENST00000582572 103 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL391813.1-201ENST00000603098 260 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC091152.3-201ENST00000604227 325 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 UCA1.1-201ENST00000620952 75 ntBASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.45□□□□□ -2.02
TRBV4-1A0A0J9YWV2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 Y_RNA.89-201ENST00000363031 102 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6-82P-201ENST00000363970 107 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 Y_RNA.256-201ENST00000364594 104 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6-534P-201ENST00000364877 106 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU1-100P-201ENST00000365255 165 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 Y_RNA.480-201ENST00000384364 102 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MIR34A-201ENST00000385130 110 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 SNORD37.1-201ENST00000390968 65 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL138827.1-201ENST00000402666 306 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL122016.1-201ENST00000403365 367 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RPS4XP7-201ENST00000406274 780 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNA5SP492-201ENST00000411330 114 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC233279.1-201ENST00000455300 423 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 DYNLL1P5-201ENST00000467158 270 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC107626.1-201ENST00000471084 183 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RPL31P41-201ENST00000477967 372 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RPS29P25-201ENST00000481709 171 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC116655.1-201ENST00000508324 901 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6-581P-201ENST00000516214 105 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNA5SP341-201ENST00000516261 117 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 SNORA25.17-201ENST00000517184 124 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MTND4LP26-201ENST00000518144 282 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 CENPUP1-201ENST00000526649 1202 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MTND1P35-201ENST00000526739 508 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 HSPE1P20-201ENST00000538133 289 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC007151.1-201ENST00000572774 483 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MIR4429-201ENST00000580105 73 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MIR3670-2-201ENST00000582974 65 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MIR3670-1-201ENST00000584160 65 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MIR3670-3-201ENST00000584855 65 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC011471.1-201ENST00000585766 187 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RPL23AP78-201ENST00000599928 470 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL355877.2-201ENST00000603670 358 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RPL23AP88-201ENST00000605759 454 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MIR3670-4-201ENST00000612260 65 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MTND5P1-201ENST00000445440 1375 ntBASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.44□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 OR4G1P-203ENST00000641984 1631 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6-942P-201ENST00000363002 107 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 Y_RNA.167-201ENST00000363735 109 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 Y_RNA.231-201ENST00000364358 102 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU1-112P-201ENST00000364401 164 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU4-66P-201ENST00000365199 138 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RPL7P37-201ENST00000425095 738 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RPL35AP12-201ENST00000425362 338 ntBASIC2.43□□□□□ -2.02
TRBV4-1A0A0J9YWV2 SRIP2-201ENST00000428470 166 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms