Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 MIR7843-201ENST00000622274 79 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-858P-201ENST00000362436 107 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 USP9YP18-201ENST00000425912 695 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 MTCYBP42-201ENST00000444653 1130 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 DUXAP8-207ENST00000456786 622 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 RNU7-59P-201ENST00000459101 61 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 RPS26P55-201ENST00000471178 356 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AC010409.1-201ENST00000487382 476 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 RPL39P36-201ENST00000490784 156 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 MTCYBP18-201ENST00000501056 747 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 RN7SKP179-201ENST00000516126 217 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AC021451.1-201ENST00000523498 1129 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 MIR4303-201ENST00000581299 66 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AL355802.3-201ENST00000607571 545 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AL512598.1-201ENST00000610158 273 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AC009269.6-201ENST00000621778 588 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AC093648.1-201ENST00000623546 606 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 AC008993.2-201ENST00000631744 806 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 MIR3529-201ENST00000637713 78 ntBASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV4A0A0B4J268 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-23P-201ENST00000363283 107 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-414P-201ENST00000363705 104 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 MIR1267-201ENST00000408723 78 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 RAC1P6-201ENST00000423911 575 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AL592045.1-201ENST00000429867 352 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AL135790.2-201ENST00000437701 267 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AL078601.1-201ENST00000444542 271 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 FDX1P2-201ENST00000450769 375 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AC108210.2-201ENST00000503681 201 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 SNORA31.19-201ENST00000517079 126 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 RN7SKP256-201ENST00000517201 314 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AP003122.4-201ENST00000530980 758 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AC018630.3-201ENST00000542637 96 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AL391813.2-201ENST00000609113 322 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AC023158.2-201ENST00000614876 543 ntBASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRAV4A0A0B4J268 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-655P-201ENST00000362858 107 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-457P-201ENST00000363999 107 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 U8.10-201ENST00000384260 133 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 RPL37P10-201ENST00000412884 288 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 TIMM9P2-201ENST00000419324 266 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 TOMM22P2-201ENST00000430735 237 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 MTCO3P5-201ENST00000433620 714 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC005094.1-201ENST00000440420 368 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 MTND4P25-201ENST00000441039 533 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 USP9YP17-201ENST00000444617 696 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 RPL23AP35-201ENST00000451906 501 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 snoU13.23-201ENST00000458863 104 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC087477.1-201ENST00000465747 340 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 MED28P2-201ENST00000475771 317 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AP001025.1-201ENST00000486139 332 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 MTCYBP40-201ENST00000509390 1135 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC093259.1-201ENST00000509755 300 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-965P-201ENST00000516721 96 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 DEFB131D-201ENST00000526803 184 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 TRAV32-201ENST00000553993 340 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC068338.1-201ENST00000565567 176 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC104072.1-201ENST00000568817 668 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 AC009977.1-201ENST00000586015 570 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 PCMTD1P7-201ENST00000634506 357 ntBASIC0.91□□□□□ -2.26
TRAV4A0A0B4J268 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.9□□□□□ -2.26
TRAV4A0A0B4J268 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.26
TRAV4A0A0B4J268 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
TRAV4A0A0B4J268 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-743P-201ENST00000364151 106 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 SNORD1A-201ENST00000364968 72 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 MIR301A-201ENST00000385261 86 ntBASIC0.9□□□□□ -2.27
TRAV4A0A0B4J268 SNORA40.6-201ENST00000391153 128 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms