Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 MTND5P33-201ENST00000571250 1450 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 MIR26B-201ENST00000362251 77 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-529P-201ENST00000363383 104 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-1284P-201ENST00000363701 100 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 snoZ40.1-201ENST00000364540 72 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-1032P-201ENST00000384100 107 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 MIR19A-201ENST00000384878 82 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RNU11-3P-201ENST00000391111 133 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RNU1-78P-201ENST00000391248 165 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RPL30P13-201ENST00000418873 348 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AL953862.1-201ENST00000423016 168 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 USP9YP18-201ENST00000425912 695 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RNU7-59P-201ENST00000459101 61 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 MEMO1P3-201ENST00000459811 302 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 RPL37P6-201ENST00000460682 294 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 PTP4A1P4-201ENST00000512479 322 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AC135279.1-201ENST00000543493 504 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AC060771.1-201ENST00000582031 164 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 BNIP3P27-201ENST00000599991 412 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 WISP1-OT1-201ENST00000602893 642 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AP001485.1-201ENST00000604799 199 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 MIR6078-201ENST00000611069 100 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AL133445.2-201ENST00000611191 527 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 AC099654.9-201ENST00000637055 678 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 FARSBP1-201ENST00000435808 1778 ntBASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV3A0A0B4J244 CBX3P1-201ENST00000325243 554 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 SNORD114-19-201ENST00000363072 75 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-487P-201ENST00000365430 104 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-898P-201ENST00000365627 104 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 RNU2-36P-201ENST00000410361 191 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 USP9YP21-201ENST00000420603 432 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 MTCO2P1-201ENST00000424648 477 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AL354941.1-201ENST00000438600 464 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 RPL39P36-201ENST00000490784 156 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC093852.1-201ENST00000503587 266 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 RN7SKP179-201ENST00000516126 217 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 RNY4P37-201ENST00000516225 96 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AP006587.4-201ENST00000526053 529 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC093249.1-201ENST00000567049 203 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC136618.2-201ENST00000575091 400 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 MIR4422-201ENST00000581938 83 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AC073413.2-201ENST00000604332 360 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 AP003485.1-201ENST00000625093 753 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 PCMTD1P7-201ENST00000634506 357 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 HAUS6P2-201ENST00000433254 2404 ntBASIC0.94□□□□□ -2.26
TRAV3A0A0B4J244 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-621P-201ENST00000364752 109 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 Y_RNA.327-201ENST00000365201 102 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 SNORA40C-201ENST00000391285 128 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AL133475.1-201ENST00000404414 305 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 MIR1285-1-201ENST00000408593 84 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 MTCO3P5-201ENST00000433620 714 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 MTCO1P44-201ENST00000441935 243 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC245517.4-201ENST00000448601 281 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC099513.1-201ENST00000490423 301 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC104629.1-201ENST00000494226 508 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC109927.2-201ENST00000506416 303 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-572P-201ENST00000516724 80 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 RN7SKP256-201ENST00000517201 314 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 OR8K2P-201ENST00000524645 927 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AP001981.2-201ENST00000603241 418 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AL358072.1-201ENST00000604156 575 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms