Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 FARSBP1-201ENST00000435808 1778 ntBASIC1.36□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 MIR412-201ENST00000362142 91 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 SNORD3E-201ENST00000362899 217 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 RNU6-546P-201ENST00000383991 107 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 RNU6-72P-201ENST00000384285 79 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL139156.1-201ENST00000412785 841 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC006366.1-201ENST00000422002 759 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 EIF4EP2-201ENST00000422816 654 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC084290.1-201ENST00000434995 374 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC245102.2-201ENST00000448956 180 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 SSXP1-201ENST00000453640 473 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 snoU109.2-201ENST00000459316 135 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL121594.1-201ENST00000475906 575 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AP001025.1-201ENST00000486139 332 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC007182.2-201ENST00000489251 402 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 RPL38P4-201ENST00000502376 214 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC020699.1-201ENST00000505161 445 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AP004607.1-201ENST00000524456 203 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC103810.8-201ENST00000607347 118 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 Z82243.1-201ENST00000609432 473 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL139418.1-201ENST00000613613 177 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL356266.1-201ENST00000623311 483 ntBASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 RNU6-655P-201ENST00000362858 107 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 Y_RNA.302-201ENST00000364997 102 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 SNORD14D-201ENST00000384390 87 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 OR9R1P-201ENST00000412200 877 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL627311.1-201ENST00000431514 115 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 RPL23AP30-201ENST00000432419 501 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC104058.1-201ENST00000448028 297 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 NDUFB1P2-201ENST00000449477 176 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL513124.1-201ENST00000450410 614 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC087884.1-201ENST00000469738 328 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 RPS29P21-201ENST00000496272 170 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 HSPE1P23-201ENST00000509838 286 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC117532.1-201ENST00000514638 323 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 CBX3P4-201ENST00000538909 354 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 SNRPGP19-201ENST00000603826 189 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC121334.2-201ENST00000605387 271 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC004908.3-201ENST00000610248 625 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC009269.6-201ENST00000621778 588 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC093648.1-201ENST00000623546 606 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AC092192.1-201ENST00000633154 1018 ntBASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV8-3A0A0A6YYJ7 AL445523.1-201ENST00000451184 1362 ntBASIC1.34□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 Y_RNA.40-201ENST00000362645 93 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 Y_RNA.97-201ENST00000363094 102 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RNU6-1210P-201ENST00000363775 107 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RNU6-83P-201ENST00000384568 112 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RNU6-906P-201ENST00000384700 70 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RNU11-3P-201ENST00000391111 133 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 CBX3P9-201ENST00000402326 552 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RNU2-23P-201ENST00000410545 195 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RN7SKP284-201ENST00000411002 343 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 SNORD56-201ENST00000413522 71 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 AL445685.2-201ENST00000422551 342 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 USP9YP18-201ENST00000425912 695 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 CALM1P1-201ENST00000442082 433 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 AL136380.1-201ENST00000447970 162 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RPL21P99-201ENST00000480369 423 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 PTP4A1P4-201ENST00000512479 322 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 AC112206.3-201ENST00000514578 389 ntBASIC1.33□□□□□ -2.2
TRAV8-3A0A0A6YYJ7 RN7SKP256-201ENST00000517201 314 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms