Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC010409.1-201ENST00000487382 476 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 Y_RNA.673-201ENST00000516306 88 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 RNU4-54P-201ENST00000516428 129 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 CR383656.7-201ENST00000548164 174 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC090079.2-201ENST00000575289 768 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC008751.2-201ENST00000597885 980 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC242498.1-201ENST00000604134 111 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC243829.6-201ENST00000612652 106 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC243994.1-201ENST00000618627 109 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC009033.1-201ENST00000624279 431 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 RNU6-1164P-201ENST00000364428 107 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 RNU6-1105P-201ENST00000384774 107 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AL109755.1-201ENST00000401791 649 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 VN1R42P-201ENST00000424651 344 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AC092628.1-201ENST00000436250 252 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 KATNBL1P3-201ENST00000443475 909 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AC132479.1-201ENST00000449160 144 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 MEMO1P3-201ENST00000459811 302 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 HMGN2P9-201ENST00000476875 229 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AC104806.1-201ENST00000508720 308 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 RNVU1-2-201ENST00000516326 135 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 PSMA3P-201ENST00000555485 635 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AC022709.1-201ENST00000615967 87 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 AL512643.1-201ENST00000635735 524 ntBASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
UBE2D4Q9Y2X8 HAUS6P2-201ENST00000433254 2404 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 SNORD114-23-201ENST00000363536 72 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 Y_RNA.796-201ENST00000364268 102 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 Y_RNA.799-201ENST00000364992 102 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 SNORD14D-201ENST00000384390 87 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AL031577.2-201ENST00000404133 280 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AC007919.1-201ENST00000429380 217 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AC098934.3-201ENST00000430450 190 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 ZNF965P-201ENST00000432501 817 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AL353718.1-201ENST00000451028 517 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 PRELID3BP1-201ENST00000457142 540 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AL163195.1-201ENST00000496941 348 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 SUMO1P1-201ENST00000497904 306 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 HMGN1P13-201ENST00000505795 138 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AC108078.1-201ENST00000508073 725 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 RNU4-57P-201ENST00000515980 135 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 RNU6-405P-201ENST00000516637 110 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 RNU6-467P-201ENST00000517027 110 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AC022616.8-201ENST00000533569 253 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 CR383656.8-201ENST00000549046 145 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AP000860.1-201ENST00000605250 559 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 AC007742.2-201ENST00000618226 398 ntBASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.25□□□□□ -2.37
UBE2D4Q9Y2X8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 RNU6-1065P-201ENST00000384513 106 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 USP9YP19-201ENST00000412165 485 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 USP9YP13-201ENST00000417797 480 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 CETN4P-201ENST00000432407 469 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 PDCD5P2-201ENST00000507570 312 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 RNU6-496P-201ENST00000516145 99 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 SNORD116-30-201ENST00000516468 85 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC103833.1-201ENST00000517442 172 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 SUB1P4-201ENST00000566062 339 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AL671309.1-201ENST00000603750 544 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 MZT1P2-201ENST00000604387 248 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AF129408.1-201ENST00000608767 431 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 AC017104.5-201ENST00000637647 639 ntBASIC0.24□□□□□ -2.37
UBE2D4Q9Y2X8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 RNU1-96P-201ENST00000364163 162 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 RNU1-139P-201ENST00000391307 165 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 MRPL35P1-201ENST00000404272 572 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 MTND4P6-201ENST00000438297 472 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC068135.1-201ENST00000446164 246 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 RPS20P10-201ENST00000451209 253 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms