Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 Y_RNA.608-201ENST00000410647 95 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AL139413.1-201ENST00000421309 217 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 MTND4P20-201ENST00000424125 869 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 PTGES3P4-201ENST00000426243 356 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 Z98742.2-201ENST00000431564 187 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 RPS6P15-201ENST00000431996 751 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC104850.1-201ENST00000435940 476 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 HMGB3P12-201ENST00000438745 556 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 MTND2P4-201ENST00000445034 1004 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 TAF9P1-201ENST00000445421 515 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 USP9YP12-201ENST00000450481 570 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 TAF9P2-201ENST00000454958 515 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 SNRPGP9-201ENST00000456025 225 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC091965.2-201ENST00000512324 613 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AL121821.2-201ENST00000556081 394 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 MIR3913-1-201ENST00000577744 102 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 MIR5089-201ENST00000580047 84 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC008088.1-201ENST00000580993 280 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC009977.1-201ENST00000586015 570 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC119751.7-201ENST00000600494 245 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 Z99497.2-201ENST00000603634 310 ntBASIC2.34□□□□□ -2.03
SMC3Q9UQE7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.34□□□□□ -2.03
SMC3Q9UQE7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.34□□□□□ -2.04
SMC3Q9UQE7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SMC3Q9UQE7 RNU6-960P-201ENST00000364056 120 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 SMIM11P1-201ENST00000369586 178 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 SNORD116-8-201ENST00000384365 95 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RNU6-19P-201ENST00000384718 107 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RN7SKP32-201ENST00000410167 303 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 USP9YP6-201ENST00000413550 854 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AF213884.2-201ENST00000510417 903 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC117532.1-201ENST00000514638 323 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RNA5SP112-201ENST00000515937 99 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RNU6-677P-201ENST00000516914 101 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RNA5SP364-201ENST00000516938 78 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RNA5SP337-201ENST00000517007 109 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RNU2-46P-201ENST00000517038 113 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 MIR3935-201ENST00000583472 104 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC174048.1-201ENST00000603389 144 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC112191.3-201ENST00000604371 277 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 RNU6-87P-201ENST00000607561 108 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC092140.2-201ENST00000618027 521 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 uc_338.20-201ENST00000621563 178 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 DUXAP9-208ENST00000622815 614 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC078883.4-201ENST00000623218 367 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 AC244517.12-201ENST00000623581 663 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 U6.99-201ENST00000637524 83 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 MTND5P42-201ENST00000637720 498 ntBASIC2.33□□□□□ -2.04
SMC3Q9UQE7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 RNY4P34-201ENST00000364779 95 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 SNORA67.3-201ENST00000384366 140 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 SNORA64-201ENST00000384674 134 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 MIR301A-201ENST00000385261 86 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AL512604.1-201ENST00000404812 257 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 RN7SKP142-201ENST00000411236 328 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 BRK1P2-201ENST00000442875 223 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 PMCHL2-203ENST00000457791 237 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AP001324.2-201ENST00000461163 319 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC010587.1-201ENST00000505809 469 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 RNU2-44P-201ENST00000516795 194 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 CBX3P7-201ENST00000532876 502 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC110760.3-201ENST00000598794 467 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC073544.2-201ENST00000601155 540 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC005034.5-201ENST00000604219 466 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AC121247.2-201ENST00000604776 136 ntBASIC2.32□□□□□ -2.04
SMC3Q9UQE7 AL603839.4-201ENST00000624658 1005 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms