Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 Y_RNA.341-201ENST00000365341 102 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 SNORA36A-201ENST00000384221 132 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 U3.37-201ENST00000408528 213 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-855P-201ENST00000410395 104 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 RPS20P14-201ENST00000412545 360 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 AL590139.1-201ENST00000416267 400 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 RNA5SP249-201ENST00000516127 99 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 IGKV1-32-201ENST00000519290 311 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 AP004607.1-201ENST00000524456 203 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 MIR4700-201ENST00000578311 74 ntBASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM35Q9UPQ4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 SNORD115-30-201ENST00000364117 82 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-978P-201ENST00000364371 103 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 Y_RNA.244-201ENST00000364484 109 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-1264P-201ENST00000383891 107 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 SNORA72-201ENST00000384339 132 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 MIR514A1-201ENST00000385133 98 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-972P-201ENST00000391208 107 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 AC098614.2-201ENST00000426040 255 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 AP000705.1-201ENST00000454567 350 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 ZFRP1-201ENST00000457579 2970 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 RPS20P22-201ENST00000473700 357 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 MRPS36P2-201ENST00000512569 299 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 RNA5SP290-201ENST00000517133 127 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 AP006289.1-201ENST00000538089 277 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 BNIP3P1-201ENST00000547295 580 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 MIR3202-2-201ENST00000635980 79 ntBASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM35Q9UPQ4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-309P-201ENST00000364573 106 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AC016831.4-201ENST00000438302 307 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AL772161.1-201ENST00000439130 476 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AC073264.2-201ENST00000448886 166 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AL132838.2-201ENST00000492041 314 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AC008897.1-201ENST00000494006 347 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 VN1R85P-201ENST00000601587 426 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 AL596275.2-206ENST00000641957 626 ntBASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TRIM35Q9UPQ4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 AC092268.1-201ENST00000342691 405 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 RNA5SP505-201ENST00000364748 108 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 Y_RNA.310-201ENST00000365063 113 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-1014P-201ENST00000383940 103 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 SNORA70F-201ENST00000384142 135 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 MIR1255A-201ENST00000408338 113 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 RNU6-383P-201ENST00000410864 94 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 RPL39P40-201ENST00000445481 146 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 TDGF1P1-201ENST00000445734 527 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 SNRPGP8-201ENST00000454064 226 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 AL359693.1-201ENST00000614959 2407 ntBASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM35Q9UPQ4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms