Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL356432.3-201ENST00000568952 465 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 MIR2682-201ENST00000580305 110 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 MIR3162-201ENST00000581818 82 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 MIR3941-201ENST00000582572 103 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 VN1R84P-201ENST00000593697 235 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC010620.2-201ENST00000600135 313 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC103710.2-201ENST00000609912 942 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 CYP3A51P-201ENST00000633513 256 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.53□□□□□ -2
NOTCH3Q9UM47 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC116158.1-201ENST00000560231 2129 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU6-28P-201ENST00000362378 107 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU6-511P-201ENST00000363496 107 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 Y_RNA.238-201ENST00000364441 102 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNA5SP240-201ENST00000365355 128 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 SAR1AP2-201ENST00000392696 594 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AL583834.1-201ENST00000406943 343 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU2-51P-201ENST00000410708 197 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNA5SP229-201ENST00000410809 99 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RPL21P112-201ENST00000434403 463 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 CBX1P4-201ENST00000439415 457 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU6-897P-201ENST00000517135 105 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AP006245.1-201ENST00000522549 120 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 MZT1P2-201ENST00000604387 248 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AL162713.1-201ENST00000604480 262 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC010900.2-201ENST00000604508 210 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 HMGN2P28-201ENST00000606102 262 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AL450472.1-202ENST00000637286 180 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 NOL8P1-201ENST00000508336 3529 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC009902.3-201ENST00000606235 2172 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU6-1287P-201ENST00000362914 107 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU6-1078P-201ENST00000364522 103 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU6-611P-201ENST00000384276 104 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 SNORA51.11-201ENST00000384442 131 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU6-1060P-201ENST00000384664 107 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC114491.1-201ENST00000416095 246 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC002075.2-201ENST00000425207 252 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 CHEK2P4-201ENST00000450340 246 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC099560.2-201ENST00000457554 255 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RN7SL93P-201ENST00000463035 293 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU6-488P-201ENST00000515918 99 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU6-397P-201ENST00000516226 104 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 MIR3133-201ENST00000583157 78 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RAC1P9-201ENST00000604990 392 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 U2.17-201ENST00000611454 95 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNVU1-4-201ENST00000612985 164 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC022149.2-201ENST00000621061 203 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU4-82P-201ENST00000362443 140 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.277-201ENST00000364754 102 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 SNORA18.3-201ENST00000384122 132 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RNU2-33P-201ENST00000410344 192 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.629-201ENST00000411368 105 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RPL30P2-201ENST00000414021 291 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 Z99755.1-201ENST00000414048 380 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RPL31P45-201ENST00000419532 356 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 MRPS18BP2-201ENST00000434310 759 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 UBE2V1P13-201ENST00000436983 439 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC087884.1-201ENST00000469738 328 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RPL21P93-201ENST00000480465 489 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC068305.1-201ENST00000497406 726 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC022493.2-201ENST00000506122 481 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 RN7SKP283-201ENST00000517197 270 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AP002392.1-201ENST00000537692 208 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC004024.1-201ENST00000549244 247 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC012433.1-201ENST00000588916 398 ntBASIC2.52□□□□□ -2.01
NOTCH3Q9UM47 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms