Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 RNA5SP295-201ENST00000362655 121 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 RNA5SP332-201ENST00000391063 115 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 SNORD66.1-201ENST00000391230 76 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 RPL23AP1-201ENST00000428990 471 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC009296.1-201ENST00000443146 155 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 OSTCP8-201ENST00000445117 448 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 CEACAMP4-201ENST00000457676 421 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC104564.1-201ENST00000493028 407 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC007458.1-201ENST00000542812 373 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC010928.2-201ENST00000588017 287 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AL159153.1-201ENST00000619688 317 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AP005019.3-201ENST00000620418 560 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AC103858.2-201ENST00000621471 543 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 MIR7702-201ENST00000621931 59 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AP000346.3-201ENST00000622821 210 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 AP000560.1-201ENST00000624150 1937 ntBASIC4.25□□□□□ -1.73
VTI1BQ9UEU0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 SNORD115-32-201ENST00000364079 82 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 Y_RNA.358-201ENST00000365491 99 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RNU6-142P-201ENST00000384019 107 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RNU6-622P-201ENST00000384272 103 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RNU6-505P-201ENST00000384427 107 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 Y_RNA.556-201ENST00000384677 113 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 MIR129-1-201ENST00000384972 72 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 MIR3065-201ENST00000390137 79 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RPL21P1-201ENST00000399532 476 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RNA5SP36-201ENST00000410197 133 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RNU7-87P-201ENST00000459343 62 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 TOMM22P6-201ENST00000465035 409 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 AC006517.1-201ENST00000480485 328 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 AF186996.7-201ENST00000492781 209 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 ANXA2P1-201ENST00000505539 926 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 AC090897.2-201ENST00000581715 130 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RAC1P9-201ENST00000604990 392 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 RMST_6.1-201ENST00000611980 203 ntBASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VTI1BQ9UEU0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 RBBP8P1-201ENST00000449447 1844 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AL353743.1-202ENST00000431724 1695 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 U3.13-201ENST00000364804 214 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 RNU6-1222P-201ENST00000384615 107 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 MIR659-201ENST00000384963 97 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 RNA5SP252-201ENST00000391131 119 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 PTMAP5-201ENST00000393073 333 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 RNA5SP390-201ENST00000410191 113 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 RN7SKP61-201ENST00000410642 295 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 FCF1P4-201ENST00000448326 183 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 MIR2355-201ENST00000517199 87 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AC034114.1-201ENST00000520293 285 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 HSPE1P4-201ENST00000550617 308 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AC064801.1-201ENST00000612025 407 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 AC091903.1-201ENST00000624322 454 ntBASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.23□□□□□ -1.73
VTI1BQ9UEU0 ZNF826P-207ENST00000622273 1910 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms