Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC013244.2-201ENST00000603396 103 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC021646.1-201ENST00000605469 484 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC010133.1-201ENST00000615809 842 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 CBX3P1-201ENST00000325243 554 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 Y_RNA.25-201ENST00000362528 102 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 RNU5E-8P-201ENST00000363502 116 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 U3.13-201ENST00000364804 214 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-481P-201ENST00000384194 107 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-16P-201ENST00000384385 107 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 MIR218-1-201ENST00000384999 110 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 HMGN2P39-201ENST00000398005 273 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 RN7SKP61-201ENST00000410642 295 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AL355994.1-201ENST00000424379 260 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 DEFB130D-201ENST00000426866 237 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 MTND4P6-201ENST00000438297 472 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC018437.1-201ENST00000492214 406 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC091860.1-201ENST00000505723 432 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC098591.2-201ENST00000510152 315 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC022861.1-201ENST00000522981 663 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC026271.5-201ENST00000577873 130 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 BNIP3P23-201ENST00000599655 511 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AL139344.1-201ENST00000605228 195 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AL118556.2-201ENST00000614375 824 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 AC009268.2-201ENST00000621925 457 ntBASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
PHRF1Q9P1Y6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 Y_RNA.245-201ENST00000364493 95 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AL158050.1-201ENST00000416077 457 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 TAF13P2-201ENST00000416876 286 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 RAC1P8-201ENST00000427086 527 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC093106.2-201ENST00000428212 385 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 KATNBL1P6-201ENST00000453433 915 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 HAR1A.1-201ENST00000459583 118 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 RPL36AP48-201ENST00000485521 314 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 RNA5SP112-201ENST00000515937 99 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 RNA5SP290-201ENST00000517133 127 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC090079.2-201ENST00000575289 768 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC004805.2-201ENST00000605382 482 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 AC006270.3-201ENST00000605967 1036 ntBASIC0.95□□□□□ -2.26
PHRF1Q9P1Y6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-28P-201ENST00000362378 107 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-839P-201ENST00000363347 108 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-575P-201ENST00000411326 105 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AC092427.1-201ENST00000439177 601 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AC026410.2-201ENST00000460281 156 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 HMGB1P36-201ENST00000487709 576 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AC139453.3-201ENST00000493276 369 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AC021146.2-201ENST00000504736 556 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AC010468.3-201ENST00000508225 458 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 RNA5SP337-201ENST00000517007 109 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 7SK.7-201ENST00000603504 247 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AL138963.2-201ENST00000605137 226 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AC011939.3-201ENST00000613686 466 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 AL138713.1-201ENST00000624026 2130 ntBASIC0.94□□□□□ -2.26
PHRF1Q9P1Y6 RNU5E-1-201ENST00000362477 120 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-359P-201ENST00000365466 108 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-637P-201ENST00000384050 107 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 U6.112-201ENST00000384129 70 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU2-33P-201ENST00000410344 192 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU2-63P-201ENST00000410792 194 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC097463.2-201ENST00000421074 142 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC019178.2-201ENST00000423595 505 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC117454.1-201ENST00000491120 168 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC125611.1-201ENST00000549563 229 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 MIR4713-201ENST00000582691 75 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC100814.1-201ENST00000606963 623 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC009237.15-201ENST00000610252 501 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC104763.3-201ENST00000613765 618 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AC253576.2-201ENST00000618815 580 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-942P-201ENST00000363002 107 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU6-657P-201ENST00000383904 107 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 AL356421.1-201ENST00000403255 413 ntBASIC0.93□□□□□ -2.26
PHRF1Q9P1Y6 RNU2-49P-201ENST00000410666 184 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 272.1 ms