Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 AC138627.2-201ENST00000624202 601 ntBASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 SNORA50A-202ENST00000629536 136 ntBASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 AL512643.1-201ENST00000635735 524 ntBASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SH3BP4Q9P0V3 AC005183.1-201ENST00000603687 1979 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 SNORD9-201ENST00000362566 104 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 RNY1P14-201ENST00000384426 108 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 RNU6-331P-201ENST00000384724 107 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 MIR568-201ENST00000385036 95 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 RNU6-55P-201ENST00000411092 107 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AL160004.2-201ENST00000432935 350 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 RN7SL594P-201ENST00000470590 287 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC011005.2-201ENST00000487324 359 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 SNORA31.1-201ENST00000515993 133 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 SNORA31.5-201ENST00000516190 133 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC011602.1-201ENST00000546484 331 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AL157871.3-201ENST00000557231 293 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 MIR1273C-201ENST00000578669 77 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 RNU6-85P-201ENST00000605989 107 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC011890.2-201ENST00000613393 294 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 AC083806.3-201ENST00000614016 455 ntBASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.34□□□□□ -1.87
SH3BP4Q9P0V3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SH3BP4Q9P0V3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SH3BP4Q9P0V3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC022336.2-201ENST00000568966 2538 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-384P-201ENST00000364900 104 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-463P-201ENST00000384340 107 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 MRPL42P3-201ENST00000401492 326 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-985P-201ENST00000410182 104 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RPL17P36-201ENST00000420302 549 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 USMG5P1-201ENST00000425964 177 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 IPO7P1-201ENST00000442031 636 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 FTH1P25-201ENST00000447665 469 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC010401.1-201ENST00000463867 348 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RPS20P22-201ENST00000473700 357 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 HMGN2P13-201ENST00000476476 274 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-470P-201ENST00000515954 104 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-699P-201ENST00000517081 110 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AL117187.1-201ENST00000555482 181 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 MIR3160-1-201ENST00000577972 85 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 NUTF2P8-201ENST00000604593 363 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC123912.5-201ENST00000605470 343 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC107294.1-201ENST00000609524 467 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 PISRT1.1-201ENST00000616930 107 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 AC027309.3-201ENST00000623419 351 ntBASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SH3BP4Q9P0V3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-1309P-201ENST00000363305 108 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 RNA5SP515-201ENST00000364570 118 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC117470.1-201ENST00000381974 330 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-574P-201ENST00000384265 107 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AL592148.1-201ENST00000413568 445 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 SYF2P2-201ENST00000417620 583 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms