Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL162395.1-201ENST00000457882 422 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 AC117503.1-201ENST00000472241 394 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 HMGB1P29-201ENST00000505659 499 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 AC074344.1-201ENST00000512823 224 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 AC009509.4-201ENST00000619202 509 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC006020.1-201ENST00000420179 1854 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-843P-201ENST00000384454 104 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 RNA5SP210-201ENST00000391034 120 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 GSTA9P-201ENST00000406231 611 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 RPLP0P7-201ENST00000416050 667 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 USP9YP20-201ENST00000419224 558 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AL139281.1-201ENST00000422120 335 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 MTCO3P30-201ENST00000426425 670 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 RPL7P12-201ENST00000446719 750 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC006512.1-201ENST00000468816 291 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 RNA5SP356-201ENST00000515972 94 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC007536.1-201ENST00000533382 349 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC027176.1-201ENST00000560204 514 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 MIR3611-201ENST00000584484 83 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 RPS15AP11-201ENST00000594193 385 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 MIR7106-201ENST00000612419 65 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC010378.1-201ENST00000619270 362 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 AC026585.1-201ENST00000619582 524 ntBASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
BLOC1S4Q9NUP1 ZNF680P1-201ENST00000436625 1469 ntBASIC2.9□□□□□ -1.94
BLOC1S4Q9NUP1 AC007336.1-201ENST00000576365 3828 ntBASIC2.9□□□□□ -1.94
BLOC1S4Q9NUP1 MTND4P14-201ENST00000435799 1354 ntBASIC2.9□□□□□ -1.94
BLOC1S4Q9NUP1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
BLOC1S4Q9NUP1 AC062016.1-201ENST00000355719 319 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 SNORD114-19-201ENST00000363072 75 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-384P-201ENST00000364900 104 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-607P-201ENST00000411283 108 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 MTND2P22-201ENST00000444325 1033 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 RNU7-26P-201ENST00000458980 63 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 snoU109.2-201ENST00000459316 135 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC133134.1-201ENST00000466800 359 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AIG1P1-201ENST00000503376 148 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-1178P-201ENST00000516674 107 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC243972.3-201ENST00000539655 198 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 MIR3941-201ENST00000582572 103 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 BNIP3P30-201ENST00000601184 574 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AC025449.1-201ENST00000603896 529 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.9□□□□□ -1.95
BLOC1S4Q9NUP1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-859P-201ENST00000362728 107 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-942P-201ENST00000363002 107 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-1119P-201ENST00000384349 108 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 RNU2-9P-201ENST00000410194 145 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 AC117522.2-201ENST00000510049 657 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 AC109329.1-201ENST00000518744 317 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 ELOCP31-201ENST00000540463 467 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 AC025678.1-201ENST00000567861 338 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 MIR4319-201ENST00000577285 85 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 AC078795.2-201ENST00000602835 1252 ntBASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.89□□□□□ -1.95
BLOC1S4Q9NUP1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
BLOC1S4Q9NUP1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms