Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC026784.1-201ENST00000507986 352 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC093303.1-201ENST00000514549 295 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 ACA59.1-201ENST00000515966 143 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC103996.1-201ENST00000555468 102 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC109446.1-201ENST00000566172 220 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC120057.2-201ENST00000571520 271 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 MIR4425-201ENST00000580572 84 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC011494.1-201ENST00000596454 237 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC024153.1-201ENST00000603103 365 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC018889.1-201ENST00000605372 397 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 RMST_8.1-201ENST00000610287 165 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AC019176.2-201ENST00000611579 315 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 AL121772.2-201ENST00000614331 297 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 MIR6500-201ENST00000622700 86 ntBASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCM2LQ9NUG4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RPL9P7-201ENST00000330965 580 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RNA5SP119-201ENST00000362715 117 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 SNORA73.2-201ENST00000364946 201 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RNU1-100P-201ENST00000365255 165 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 SNORD42.2-201ENST00000365570 69 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 MIR184-201ENST00000384962 84 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 AL513475.1-201ENST00000406602 315 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 Y_RNA.646-201ENST00000410980 101 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 AC005300.1-201ENST00000428401 373 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 SETP5-201ENST00000437270 562 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 AL513043.1-201ENST00000439124 535 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 AC125238.1-201ENST00000448842 249 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 MTCO3P10-201ENST00000455912 772 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RPL9P9-202ENST00000466501 579 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RPL23AP14-201ENST00000468281 468 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RPL7P42-201ENST00000481005 679 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RPL23AP49-201ENST00000492925 468 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 AC097473.1-201ENST00000508142 408 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 SNORA43.2-201ENST00000516652 128 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 CBX3P7-201ENST00000532876 502 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 AC005476.1-201ENST00000554427 397 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 MIR6868-201ENST00000611215 58 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 MIR3199-2-201ENST00000636243 86 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 MTND5P19-201ENST00000424872 1794 ntBASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
CCM2LQ9NUG4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC233263.6-201ENST00000631132 1963 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 SNORA57.3-201ENST00000411095 141 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AL714022.1-201ENST00000439897 151 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 CYCSP32-201ENST00000440548 321 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 NIPA2P5-201ENST00000452282 464 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC110768.1-201ENST00000509222 400 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 PTP4A1P4-201ENST00000512479 322 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 SMURF2P1-201ENST00000514992 481 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 SNORA74D-201ENST00000516404 141 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 SNORA70.24-201ENST00000517233 118 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC021739.1-201ENST00000559631 174 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 CPDP1-201ENST00000579660 283 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC005899.2-201ENST00000584353 90 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 VN1R107P-201ENST00000601784 209 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AL080274.1-201ENST00000605565 220 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC005046.1-201ENST00000608515 625 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 AC134503.1-201ENST00000633048 54 ntBASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.6□□□□□ -1.83
CCM2LQ9NUG4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CCM2LQ9NUG4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCM2LQ9NUG4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.59□□□□□ -1.83
CCM2LQ9NUG4 RNU6-428P-201ENST00000362942 107 ntBASIC3.59□□□□□ -1.83
CCM2LQ9NUG4 RNU6-942P-201ENST00000363002 107 ntBASIC3.59□□□□□ -1.83
CCM2LQ9NUG4 Y_RNA.138-201ENST00000363462 102 ntBASIC3.59□□□□□ -1.83
CCM2LQ9NUG4 RNU6-105P-201ENST00000363909 104 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms